Pairwise Alignments

Query, 334 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECRC100

 Score =  115 bits (289), Expect = 1e-30
 Identities = 90/315 (28%), Positives = 153/315 (48%), Gaps = 9/315 (2%)

Query: 3   QKPFVSAQEVAERAGVSRSAVSRTFTPGASVSPETRRRVVEAAEALGYHVNHLARGLMRN 62
           Q+   + ++VA +A VS + VSR       VS  TR RV +AA  +GY    + R + RN
Sbjct: 6   QETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRN 65

Query: 63  ESGIVCLIVSEMSTPYRANLIRAMTQQLQNAGKVAMLINTDRSDDSVDLALRQAIRYRAD 122
           ES  + +IV ++  P+ + +IR +     N G + ++ +    +      +   I  + D
Sbjct: 66  ESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQID 125

Query: 123 ASIIL-SGMP-DRSITQLCLKNGQRLVLINRDDDQQGPLRINLDDAEAAGRVVTAFVRAG 180
             ++L S +P D SI +   +N   +V+ N    +     +++D+  AA   V      G
Sbjct: 126 GMLLLGSRLPFDASIEE--QRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQG 183

Query: 181 CRRLAFANSQAGTPSLMAREHGFVATARAMGL---PVLVERHGPTNYESGRVLAQRLLTL 237
            +R+         P    R  G+V   R  G+   P  + R G   +E+G    Q+LL L
Sbjct: 184 HKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIAR-GDFTFEAGSKAMQQLLDL 242

Query: 238 GERPDAVFCATDLLACGFMDAARHQFRVSIPDLLCVAGFDDIEQAAWSSYDLTTFAQPVD 297
            + P AVFC +D++A G +  A+ Q  + +P+ L + GFD+I+   +    LTT AQP  
Sbjct: 243 PQPPTAVFCHSDVMALGALSQAKRQ-GLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRY 301

Query: 298 RIAQEAVAWLVNERQ 312
            I +EA+  L+++ Q
Sbjct: 302 EIGREAMLLLLDQMQ 316