Pairwise Alignments

Query, 334 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 354 a.a., santhopine-responsive transcriptional repressor from Agrobacterium fabrum C58

 Score =  107 bits (267), Expect = 4e-28
 Identities = 89/351 (25%), Positives = 155/351 (44%), Gaps = 22/351 (6%)

Query: 1   MPQKPFVSAQEVAERAGVSRSAVSRTFTPGASVSPETRRRVVEAAEALGYHVNHLARGLM 60
           + + P V+  +VA RAGVS++  +R      +VS   R  V  AA +L Y  N LAR + 
Sbjct: 5   LSKSPSVTVADVARRAGVSKATAARVLGGYGTVSDRVREAVTAAASSLDYRPNELARSMT 64

Query: 61  RNESGIVCLIVSEMSTPYRANLIRAMTQQLQNAGKVAMLINTDRSDDSVDLALRQAIRYR 120
              SG + ++V ++  P+ +  +R +T   + AG   +LIN+     +   A+R  +  R
Sbjct: 65  TGRSGTIGVVVGDIENPFFSLAVRGITDVARQAGFTVILINSGEDAAAEKAAIRTLLAKR 124

Query: 121 ADASIILSGMPDRSITQL--CLKNGQRLVLINRDDDQQGPLRINLDDAEAAGRVVTAFVR 178
            D  +I+S   +  +  L   +++G  L L++R  D      +  DD   A  V +  + 
Sbjct: 125 VD-GLIVSPAKENDVEHLHEVIRSGLPLALLDRGSDTLEVDTVLADDRYTAENVTSRLIA 183

Query: 179 AGCRRLAFANS------------QAGTPSLMAREHGFVATARAMGLPVLVE--RHGPTNY 224
            G RR+A+  +               T S+  R  G++A  R  G   + +  + G    
Sbjct: 184 LGHRRIAYLTACDTPDHRFRTPQDISTGSVRRRIEGYLAVCREAGFIGMEDWVKVGAVTP 243

Query: 225 ESGRVLAQRLLTLGERPDAVFCATDLLACGFMDAARHQFRVSIPDLLCVAGFDDIEQAAW 284
           E    +    L  G RP A+  +  ++      A R +  ++IP  L +  F D +  + 
Sbjct: 244 ERTHRIVIETLQSGHRPTAIIASDSIIGLEVFKAHR-ELGLNIPGDLSLVSFHDADWTSV 302

Query: 285 SSYDLTTFAQPVDRIAQEAVAWLVNERQEPVDHSVR---FQPDLVWRSSIR 332
           ++  +T   QPV  +   A   LV ER    D + R    + ++V R+S R
Sbjct: 303 TTPPVTVVRQPVYELGATAARLLV-ERLNGEDRAARKVVLKNEVVERASTR 352