Pairwise Alignments

Query, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

Subject, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  166 bits (421), Expect = 7e-46
 Identities = 113/352 (32%), Positives = 185/352 (52%), Gaps = 11/352 (3%)

Query: 14  RLLTAILLGAV--LSGCSQEKVETKETIRPVKVVEIAAAGEPRELHYSGSVRARTEMNLG 71
           R L+ + LG +  L+GCS+E+V   ET+  V V ++        +  +G V+AR + +L 
Sbjct: 5   RPLSVVCLGLLYMLTGCSKEEVP--ETLPRVGVQQVQPTDFAARVTLTGDVQARVQTDLS 62

Query: 72  FRVGGKITERLVNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTTALAKLRA 131
           FRVGGKI  R V++GD VK   +LAR+D  D +  V SA+A + AA+ +V  T+ A +R 
Sbjct: 63  FRVGGKIISRSVDVGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQTSAAFVRQ 122

Query: 132 EQLFTKSFSSQAQLDQATLLYDQAVSTRDAAASSLSQAKNQVSYTDLKADQNGIVTAVNA 191
           ++L  K ++SQ++ D A        S   AA + L+ A  Q+SYT L ++  G++T   A
Sbjct: 123 QKLLPKGYTSQSEYDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAGVITERQA 182

Query: 192 DIGQVVGTGTPVVTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLVLDGHVREV 251
           ++GQVV    P+ ++AVDG+++    V E  +        V V    +  +   G VRE+
Sbjct: 183 EVGQVVQATMPIFSLAVDGDRDAVFNVYESLLVAPPSDAGVVVSLLDDPKVQAHGFVREI 242

Query: 252 SGSADQRSRTFSVRVSL---PNDERVLLGMTATVEAAAASSAPLVSIPLSALSKKDGQNI 308
           + +   +S T  V+V L   P   ++   +TAT     A   P + +P SAL+K   +  
Sbjct: 243 TPTVSAQSGTVQVKVGLKDVPPGMQLGAPVTATTN---AQGRPSIELPWSALTKALHEPA 299

Query: 309 VWIVDRDFSTVHARPIKLADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLKV 360
           VW+V  +   V  R +++  +    + V  GL  G+ VV  G Q +   ++V
Sbjct: 300 VWVVG-EGDKVELRKVEIRRYLTGKIVVASGLKGGETVVVNGGQLLHPGMQV 350