Pairwise Alignments

Query, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

Subject, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  181 bits (459), Expect = 3e-50
 Identities = 121/354 (34%), Positives = 190/354 (53%), Gaps = 5/354 (1%)

Query: 12  VARLLTAILLGAVLSGCSQEKVETKET-IRPVKVVEIAAAGEPRELHYSGSVRARTEMNL 70
           V  L T +L  ++LSGC+    E     +RPV+ V +A +     L  +G +R   E  L
Sbjct: 25  VGGLGTLLLAASLLSGCNDAGREAAAAPLRPVRTVTVAPSVAGEVLSQTGEIRPTEETAL 84

Query: 71  GFRVGGKITERLVNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTTALAKLR 130
           GFR+ G++  R V++G  VK G+++A +DA D    + SA+A+L  A    +       R
Sbjct: 85  GFRLDGRVVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKR 144

Query: 131 AEQLFTKSFSSQAQLDQATLLYDQAVSTRDAAASSLSQAKNQVSYTDLKADQNGIVTAVN 190
            +QL      +++QLD+A   +  AVS R++A +S++  ++++ YT L A   G++TAV+
Sbjct: 145 MKQLAPNGAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVS 204

Query: 191 ADIGQVVGTGTPVVTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLVLDGHVRE 250
           A+ GQVV  G  VV +A    ++    V E  +        V V   SN  +   GHVR+
Sbjct: 205 ANPGQVVNAGQEVVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRD 264

Query: 251 VSGSADQRSRTFSVRVSL--PNDERVLLGMTATVEAAAASSAPLVSIPLSALSKKDGQNI 308
           VS  AD ++RT+ VR+SL  P  E V LG T   E        ++++P SAL+++ G+  
Sbjct: 265 VSPLADAQTRTWRVRISLVEPPPEMV-LGATVQGE-VTLPGGNVINLPASALTRQGGRPA 322

Query: 309 VWIVDRDFSTVHARPIKLADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLKVRL 362
           V++VD    T+  +PI L  ++D+ + V DGL AGD V  AG   +    KV L
Sbjct: 323 VFVVDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKVTL 376