Pairwise Alignments

Query, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

Subject, 373 a.a., Multidrug resistance protein MdtA from Azospirillum sp. SherDot2

 Score =  155 bits (392), Expect = 2e-42
 Identities = 117/365 (32%), Positives = 175/365 (47%), Gaps = 17/365 (4%)

Query: 12  VARLLTAILLGAV---LSGCSQEKVETKETIRPVKVVEIAAA----GEPRELHYSGSVRA 64
           V  +LT +L  A    LS  +QE     +  +   +V +AAA    G  R   ++G V A
Sbjct: 9   VGGVLTVVLGAAAVVTLSMHTQEASAVSDPRQEAPIVRLAAAVPVAGSDRG--FTGVVGA 66

Query: 65  RTEMNLGFRVGGKITERLVNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTT 124
           R + NLGFRV GKI ERL  +G  VK G  L RID TD RLA+T+      AA   V  T
Sbjct: 67  RVQSNLGFRVPGKIIERLATVGQPVKAGQPLMRIDETDLRLALTAKRNAAAAARAVVVQT 126

Query: 125 ALAKLRAEQLFTKSFSSQAQLDQATLLYDQAVSTRDAAASSLSQAKNQVSYTDLKADQNG 184
              + R   L    ++S+ + +QA    D A +   +  +    A+N+ +Y+ L AD +G
Sbjct: 127 QADERRYASLLNDGWASRQRHEQAKAALDTARAQFASTEADARVAENEATYSVLVADSDG 186

Query: 185 IVTAVNADIGQVVGTGTPVVTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLVL 244
            V     + GQVV  G  VV +A  G +E  +A+PE    +   G P     +  D    
Sbjct: 187 TVVETLGEPGQVVAAGQTVVRLAQAGPREAVVALPETIRPQI--GSPAEASLYGADGQRY 244

Query: 245 DGHVREVSGSADQRSRTFSVRVSLPNDERVL-LGMTATVEAAAASSAPL----VSIPLSA 299
             H+R++S +AD ++RT+  R  L  D     LG T T+              + +PL A
Sbjct: 245 GAHLRQLSDAADAQTRTYEARYVLDGDAAAAPLGATVTIRLTGRPGGQTDRADMQVPLGA 304

Query: 300 LSKKDGQNIVWIVDRDFSTVHARPIKLADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLK 359
           +     +  VW ++R  STV  + ++L   + +   V+ GLG GD VV+ G   + E ++
Sbjct: 305 VLDDGRRTGVWTLERTSSTVRFQTVRLVRVSGD-TAVISGLGLGDPVVSLGAHLLQEGVR 363

Query: 360 VRLQA 364
           VR  A
Sbjct: 364 VRTAA 368