Pairwise Alignments

Query, 1049 a.a., efflux protein from Sinorhizobium meliloti 1021

Subject, 1021 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  903 bits (2334), Expect = 0.0
 Identities = 474/1014 (46%), Positives = 670/1014 (66%), Gaps = 8/1014 (0%)

Query: 11   FNLSRWAIGHPSIARFLLALIIITGGLGLLRMGQREDPEFTFRVMVVQAVWPGASIQEME 70
            FNLS WA+ +  I  FL+ L+   G +   ++GQ EDP FTF+ MV++ +WPGAS +E+ 
Sbjct: 3    FNLSAWALRNRQIVLFLMILLAAIGAMSYTKLGQSEDPPFTFKAMVIRTLWPGASAEEVA 62

Query: 71   DQVVNKIERKLQETPHLDFVRSYTRAGSAIITVQIEGDTNADEVADAFYQVRKKVGDIAN 130
             QV  +IE+KL ET   + + S++R G + +T       ++ ++ + +YQ+RKKV DI +
Sbjct: 63   RQVTERIEKKLMETGEYERIVSFSRPGESQVTFMARDSLHSKDIPELWYQIRKKVADIRH 122

Query: 131  ELPEGVLGPYFNDEFGDTFITLHSISGDGFSYPELKRFAIEGRDMLLATPGVEKVVVLGD 190
             LP  + GP+FNDEFG TF  +++++G+GF Y  LK +A   +  L     V KV ++G 
Sbjct: 123  TLPPEIQGPFFNDEFGTTFGNIYALTGEGFDYAVLKDYADRIQIQLQRVKDVGKVDLIGL 182

Query: 191  QPEKIYIDLSSKVLAERGLTFNDLRNAIAGQNNVDYAGSVDTGTRSVRISVEGDVTKVED 250
            Q EK++I+LS+  LA  G+    ++ A+  QN V  AG  +T +  +++ V G    VE 
Sbjct: 183  QDEKVWIELSNLKLATLGVPLEAVQKALQEQNAVSTAGFFETPSERLQLRVSGRFDSVEQ 242

Query: 251  IRELRLRAGDRTIRLGDIATVTSGLEDPYARKFRFNGHDSVQIGVVMAKGFNVTDVGKAV 310
            IR+  +R GDRT R+GD+A V  G  DP A + RF G D++ + V M  G ++  +GKA+
Sbjct: 243  IRQFPIRVGDRTFRIGDVAEVHRGFNDPPAPRMRFMGEDAIGLAVSMKDGGDILVLGKAL 302

Query: 311  EATYDRFESALPYGVSVDQVSNQPEVVTEAITEFSHALIEALIIVLIVSFLSIGWRSGLV 370
            E  ++R    LP G+++ +VS+QP  V   + EF   L+EAL+IVL+VSF S+G R+GLV
Sbjct: 303  EGEFERLAHNLPAGMALRKVSDQPAAVKAGVGEFVQVLVEALVIVLLVSFFSLGLRTGLV 362

Query: 371  IAIAIPLVLAATFAIMYELGIDLQRISLGALIIALGLLVDDAMIVVEMMERKLEEGLEKI 430
            +A+AIPLVLA TFA M+  GI L +ISLGAL++ALGLLVDDA+I VEMM  K+E+G +++
Sbjct: 363  VALAIPLVLAMTFAAMHYFGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYDRL 422

Query: 431  DAASFAYSSTAFPMLTGTLITTAGFIPVGFAESTAGEYVRSLFYVVGIALVVSWFVAVYF 490
             AAS+A++STAFPMLTGTLIT AGF+P+  A S+ GEY RS+F VV IAL+ SW  AV F
Sbjct: 423  KAASYAWTSTAFPMLTGTLITAAGFLPIATAASSTGEYTRSIFQVVTIALLTSWVAAVVF 482

Query: 491  TPWLGYMILKQ--RHHAGTHH------DVFDTRFYRRLRTTVGWAVRHRVVVLLMTLAIF 542
             P+LG  +L    + HA  H       D + T FY+R+R  V W VR R  V+L+T+A F
Sbjct: 483  VPYLGERLLPDLAKLHAARHGKDGHAPDPYATPFYQRVRRLVEWCVRRRKTVILLTIAAF 542

Query: 543  VTSLWAFQFIPKNFFPQSSRPEILVDLWLPEGTSIKEVEKQAKALEERMMDDEDKRFIAT 602
            V S+  F+F+P+ FFP S RPE++VDL L EG S+    ++ K LE  +   +       
Sbjct: 543  VGSILLFRFVPQQFFPASGRPELMVDLKLAEGASLANTAERVKQLEALLKQQDGIDNYVA 602

Query: 603  YIGEGAPRFFLPLDQQLRNPNFAQLLVMAKDEPARERLIAKLRTILAEDFPSIRAKVDRL 662
            Y+G G+PRF+LPLDQQL   +FAQ +V+AK    RERL + L + + + FP +RA+V RL
Sbjct: 603  YVGTGSPRFYLPLDQQLPAASFAQFVVLAKSMEDRERLRSWLISTVDQQFPDLRARVTRL 662

Query: 663  FLGPPTGWPVQMRVMGPDREEVRRIADQVKTKFQENPMLGAIHDDWLEPVPAMKLVIDQD 722
              GPP G+PVQ RV G   E+ R +A +V  K +ENP +  +H DW EP  A+ L IDQD
Sbjct: 663  ENGPPVGYPVQFRVTGEHIEKARALAREVADKVRENPHVVNVHLDWEEPSKAVFLEIDQD 722

Query: 723  RARALGITSQRIRQMLQAAMSGVPLDSFRDGEETVSIMAREPGGNRHLLSAVQSVYVPTD 782
            RARALG+++  +   LQ+++ G  +  +R+  E + I+ R     R  L+ + S+ +PTD
Sbjct: 723  RARALGVSTSHLASFLQSSLIGTTVSQYREDNELIEILLRGTLQERSELANLGSLALPTD 782

Query: 783  FGGFVPVSQIAKVVPVMEQGIEWRRDRLPTITVRGTLPDGVQPNDVAMQLFDELKGLRDG 842
             G  V +SQ+A +    E+GI W R+RLPT+TVR  + D  QP  +  Q+   L+ +R  
Sbjct: 783  NGQSVALSQVATLEYGFEEGIIWHRNRLPTVTVRADIYDQEQPATLVKQILPTLQEIRAK 842

Query: 843  LAPGYKVEIQGGAEDSAESQASIAAKAPIMLVVIVILLMVQLQHFGKAMLVLATGPLGII 902
            L  GY +E+ G  EDS   Q S+ A  P+ +VV++ LLM+QL+ F + ++V  T PLG+I
Sbjct: 843  LPDGYLLEVGGTVEDSERGQKSVNAGMPLFIVVVLSLLMIQLRSFSRTVMVFLTAPLGLI 902

Query: 903  GAAAALLISGAPFGFVAILGVIALLGIIIRNSIILVDQIDQDIAAGMERSEAIIGAAVRR 962
            G    LL+   PFGFVA+LG IAL G+I+RNS+ILVDQI+QDIAAGMER +AII A VRR
Sbjct: 903  GVTLFLLVFRQPFGFVAMLGTIALAGMIMRNSVILVDQIEQDIAAGMERWQAIIEATVRR 962

Query: 963  FRPIILTALTAVLALIPISRGVFWGPLAYAMMGGILVATVLTILVLPAGYALFF 1016
            FRPI+LTAL AVLA+IP+SR VF+GP+A A+MGG++VATVLT+L LPA YA +F
Sbjct: 963  FRPIVLTALAAVLAMIPLSRSVFYGPMAVAIMGGLIVATVLTLLFLPALYAAWF 1016