Pairwise Alignments

Query, 318 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 301 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  234 bits (596), Expect = 3e-66
 Identities = 122/280 (43%), Positives = 175/280 (62%), Gaps = 8/280 (2%)

Query: 40  VPGLSLYRIVEPAGPFSSVYEPSLSFIIKGSKNVRVGNETLVYDEGCFFLTAIGVPVTAQ 99
           +  L + R   P+ P    Y P L+ +I+GSK+V++G +T+ Y  G + LT++ +PV  +
Sbjct: 29  IESLGISRRTIPSAPCHGNYRPCLAMVIQGSKSVQLGTDTINYGAGDYLLTSLDLPVAWR 88

Query: 100 ICAASEGEPYVAAALRLDMGKVRRIIADHDIHPTDIPER-DLGVAVGTATRELFDALFRL 158
           +  AS   P+   AL +D  K+  ++    I P+  P     G+ V  AT EL DA  RL
Sbjct: 89  VVEASREVPHFCIALAIDSEKLLDLMRRIPIDPSSEPANAQRGIVVNRATPELLDAAIRL 148

Query: 159 ISLASSPADIPFLAGHIQNEILYRLLTGEQGARLRRFALAGTHSNRVAKAVLWLKENYTK 218
           + L   PADI  +A  I+ EILYR+LTG  G +L     AG+H NR+A+A+ WL+EN+ +
Sbjct: 149 LRLLDRPADIAAMAPLIEQEILYRILTGPAGGQLMNVIAAGSHGNRIARAIAWLRENFAR 208

Query: 219 PLRVEELAEIANMGVSTLHHHFRAMTAMSPLQFQKHLRLHHARELMLSKSLDAATAALQV 278
            LR+EELAE   M VS+ HHHF+ +TAM+P+Q+QK LRLH AR LML + LDA TA  +V
Sbjct: 209 QLRIEELAEQIGMSVSSFHHHFKTITAMTPVQYQKQLRLHEARRLMLLERLDAGTAGHRV 268

Query: 279 GYESPTQFNREYRRAFGHPPLRDIRAILNSNDSTRRNSAG 318
           GY+SP+QF+REY R +G  P RD+       D++R  +AG
Sbjct: 269 GYQSPSQFSREYSRFYGLSPSRDV-------DASREIAAG 301