Pairwise Alignments

Query, 706 a.a., transporter protein from Sinorhizobium meliloti 1021

Subject, 666 a.a., Osmo-dependent choline transporter BetT2 from Pseudomonas sp. DMC3

 Score =  521 bits (1342), Expect = e-152
 Identities = 262/654 (40%), Positives = 405/654 (61%), Gaps = 18/654 (2%)

Query: 52  KVNLPVFVGSVAVIALFVGIGVIAPKRAESIFSGMQTAILSGFGWLYLLSVAVFLFSMLF 111
           ++N PVF  +  VI LF  + +  P++A +     Q    +  GW Y+L++ ++L  ++ 
Sbjct: 13  RMNPPVFYFAATVILLFGLVVIAIPEQAGAWLLEAQNWAANTVGWYYMLAMTLYLVFVVV 72

Query: 112 LAFSRYGELKLGPDDSEPEFRYLSWIAMLFAAGMGIGLMYFAVGEPMTHFASPPEAEPLT 171
            A S YG++KLG D  EPEF YLSW  MLFAAG+ I L +F V EP+TH   PP+ E  T
Sbjct: 73  TALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHMLQPPQGEAGT 132

Query: 172 IAAQREAMSVTFFHWGVHAWAIYSVVGLSLAYFGYRYNLPLTVRSGLYPLLKEGIHGPIG 231
             A R+AM + F HWG+H W +++ VG++LAYF YR+NLPL +RS LYPL+ + I+GPIG
Sbjct: 133 ADAARQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIG 192

Query: 232 HVVDIFAICGTMFGLATSLGFGILQINSGLNYLLGIPQSIYVQLLLVTVVTAIATISVVT 291
           + VD F I  T+FGL   +GFG+L +NSGL+YL GI  + ++Q+ L+T++   A I  V+
Sbjct: 193 YAVDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQVGLITLMMGAAIIVAVS 252

Query: 292 GVEKGVRILSETNLFLAVLLMLFVLVVGPTGTLMRDFVQNIGLYLDSLVLRTFNIYAYE- 350
           GV+KGVR++S+ N+ LA  L+LFVL  GPT  L+   +QN+G YL +L +++F++YAY+ 
Sbjct: 253 GVDKGVRVMSDINMLLACGLLLFVLFAGPTQHLLNTLIQNVGDYLGALPMKSFDLYAYDK 312

Query: 351 PRPWIDSWTLFYWAWWISWSPFVGMFIARISRGRTVREFVTAVLFVPAMFTFLWMTVFGN 410
           P  W+  WT+FYWAWWI+WSPFVG+FIARISRGRT+REFV  VL +P  FT  WM++FGN
Sbjct: 313 PSDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWMSIFGN 372

Query: 411 TAIYVDTTIANGELARDVKA--DLSVALFQFFEYLPWPAVTSTLAVLLVSIFFVTSSDSG 468
           +A+  D  + +G  A  + A  + S++++   E  PW      + V +  +FFVTS+DSG
Sbjct: 373 SAL--DQVLNHGMSALGMSAIDNPSMSIYLLLETYPWSKTVIAVTVFISFVFFVTSADSG 430

Query: 469 SLVIDTIASGG---ETATPALQRIFWCSLSGIVAAVLLSTGGLTALQSATISTALPFSLV 525
           ++V+ T+++ G   +   P   R+FW +++ ++ + LL +G + AL+SA + T+LPFSL+
Sbjct: 431 TVVLSTLSAKGGNPDEDGPKWLRVFWGAMTALITSALLFSGSIDALKSAVVLTSLPFSLI 490

Query: 526 MLILVWSL----FVGMRADLARTQSPGSLGPRAYPASGVPWQRRLAMTLSTPDRRAVEKF 581
           +L+++W L    ++  +  +A+  S   +        G  W++RL+  +  P R  V +F
Sbjct: 491 LLLMMWGLHKAFYLESQKQIAQLHSLAPVSGSRRGTGG--WRQRLSQAVHFPSRDEVYRF 548

Query: 582 LQASVLPALEAVARELTRRSRPASVGRDAETGALTLTVPAEGHRDFVYGVQMSEHKLPAF 641
           ++++V PA+E V      +        D     ++L +       F+Y VQM  +  P+F
Sbjct: 549 MESTVRPAIEEVTAVFVEKGLHVVTQPDPAHDNVSLEIGHGEQHPFIYQVQMRGYFTPSF 608

Query: 642 TAYDATVADVR----YEARTFFSDGSRGYDIMGMADNQIINDVLFQFERYTGFV 691
                    +     Y A    S+GS+ YD++G    QIIND+L Q+ER+  F+
Sbjct: 609 ARGGMGSKQLNNRRYYRAEVHLSEGSQDYDLVGYTKEQIINDILDQYERHMQFL 662