Pairwise Alignments

Query, 706 a.a., transporter protein from Sinorhizobium meliloti 1021

Subject, 677 a.a., choline transporter of high affinity (NCBI) from Escherichia coli BW25113

 Score =  489 bits (1260), Expect = e-142
 Identities = 258/660 (39%), Positives = 400/660 (60%), Gaps = 18/660 (2%)

Query: 46  HQVQRFKVNLPVFVGSVAVIALFVGIGVIAPKRAESIFSGMQTAILSG-FGWLYLLSVAV 104
           H  ++ K+N  VF  S  +I LF  +  I  +   +++ G     +S  FGW YLL+  +
Sbjct: 6   HSREKDKINPVVFYTSAGLILLF-SLTTILFRDFSALWIGRTLDWVSKTFGWYYLLAATL 64

Query: 105 FLFSMLFLAFSRYGELKLGPDDSEPEFRYLSWIAMLFAAGMGIGLMYFAVGEPMTHFASP 164
           ++  ++ +A SR+G +KLGP+ S+PEF  LSW AMLFAAG+GI LM+F+V EP+T +  P
Sbjct: 65  YIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQP 124

Query: 165 PEAEPLTIAAQREAMSVTFFHWGVHAWAIYSVVGLSLAYFGYRYNLPLTVRSGLYPLLKE 224
           PE    TI A R+AM  T FH+G+  W++Y+++G++L YF YRYNLPLT+RS LYP+  +
Sbjct: 125 PEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGK 184

Query: 225 GIHGPIGHVVDIFAICGTMFGLATSLGFGILQINSGLNYLLGIPQSIYVQLLLVTVVTAI 284
            I+GPIGH VDI A+ GT+FG+AT+LG G++Q+N GL+ L  IP S+  +  L+ +   I
Sbjct: 185 RINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVII 244

Query: 285 ATISVVTGVEKGVRILSETNLFLAVLLMLFVLVVGPTGTLMRDFVQNIGLYLDSLVLRTF 344
           ATISV +GV+KG+R+LSE N+ LA+ L+LFVL +G T  L+   V N+G Y++  +  T 
Sbjct: 245 ATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTL 304

Query: 345 NIYAYE-PRPWIDSWTLFYWAWWISWSPFVGMFIARISRGRTVREFVTAVLFVPAMFTFL 403
           N +A++ P  W+++WTLF+WAWW++WSPFVG+F+ARISRGRT+R+FV   L +P  FT L
Sbjct: 305 NSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLL 364

Query: 404 WMTVFGNTAIYVDTTIANGELARDVKADLSVALFQFFEYLPWPAVTSTLAVLLVSIFFVT 463
           W++VFGN+A+Y +        A +         +      P    ++++A +   +F+VT
Sbjct: 365 WLSVFGNSALY-EIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVT 423

Query: 464 SSDSGSLVIDTIAS---GGETATPALQRIFWCSLSGIVAAVLLSTGGLTALQSATISTAL 520
           S+DSG+LV+    S      +  P   R+FW    G++   +L T G++ALQ+ T+   L
Sbjct: 424 SADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVIMGL 483

Query: 521 PFSLVMLILVWSLFVGMRA-DLARTQSPGSLGPRAYPASG-VPWQRRLAMTLSTPDRRAV 578
           PFS V+  ++  L+  ++  D  R  +     PR       + W++RL+  ++ P  R  
Sbjct: 484 PFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYT 543

Query: 579 EKFLQASVLPALEAVARELTRR-------SRPASVGRDAETGALTLTVPAEGHRDFVYGV 631
           ++ ++    PA+E VA+EL  R       S P   G+  + G L L V     ++FVY +
Sbjct: 544 KQMMETVCYPAMEEVAQELRLRGAYVELKSLPPEEGQ--QLGHLDLLVHMGEEQNFVYQI 601

Query: 632 QMSEHKLPAFTAYDATVADVRYEARTFFSDGSRGYDIMGMADNQIINDVLFQFERYTGFV 691
              ++ +P FT    +     Y   TF  +GS+G D+M  +  Q+I D+L Q+ER+  F+
Sbjct: 602 WPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFI 661