Pairwise Alignments

Query, 405 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 392 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 90/409 (22%), Positives = 148/409 (36%), Gaps = 34/409 (8%)

Query: 1   MERKEIAIIGGGPAGLMAAEVLSRSDHAVTVYEAMPTAARKFLLAGKSGLNITHSEDYRD 60
           M   E+ IIG G AGLM A   +     V + +    A +K L++G    N T+   Y +
Sbjct: 1   MRSTEVVIIGAGAAGLMCALTAAGRGRKVMLIDHANKAGKKILMSGGGRCNFTNM--YTE 58

Query: 61  FATRFGDASARLRPGLDAFTPRDVRVWAAGLDAETFVGSSGRVFPKAMKASPLLRAWLRR 120
            A      +   +  L  +T  D     A           G++F    K+S +L   L  
Sbjct: 59  PANFLSHNAHFCKSALARYTQWDFIGLVAKHGVPYHEKKLGQLFCD-NKSSDILGMLLDE 117

Query: 121 LEAQGV--RLLTRHRWSGFAENGYIFDTPEGKTVVRCDAALLALGGASWPRLGSDAAWMP 178
               GV   L T  +     E GY   T  G+  +RC++ ++A GG S P LG+      
Sbjct: 118 CIQVGVSLHLDTSVQEIAKLEAGYQLQTTLGE--LRCESLVIATGGLSIPTLGATGFGYQ 175

Query: 179 LLRARGVPISDFRPANCGFDVAWSEIFRERFAGQPLKGVTATSDAGTVSGEFVVTRHGIE 238
           + +  G  +   R     F +              LK +       +V            
Sbjct: 176 VAKQFGHELLPTRAGLVPFTIT-----------DQLKDLCGELSGTSVDCLVSCNGQSFR 224

Query: 239 GSLVYAH-----AASLRDRLDRDGTAALLLDLTPGRTAGRLARDLARQDRKASFSNRLRK 293
            ++++ H      A L+     +    + ++L P   A    +   +Q  + +   +   
Sbjct: 225 ENILFTHRGLSGPAILQISSYWEPGDTVEINLLPDHDAHTWLQQ--QQVERPNSELKTLL 282

Query: 294 GAGLDPVKAALLREL------SPEAARAAAEQLAAEIKALPLPVLATRPIAEAISSAGGI 347
           G       A LL E         +   A    +A ++ +  L    T     A  + GG+
Sbjct: 283 GEIFTKKMANLLAETWFVSKPMKQYTHAEIADIAQKLGSWQLVPAGTEGYRTAEVTLGGV 342

Query: 348 RLDAIDDRYM--LKALPGLFAAGEMLDWEAPTGGYLLTACLAMGRAAAR 394
               +  + M  LK+ PGL+  GE+LD     GG+      A G AAA+
Sbjct: 343 DTREVSSKTMESLKS-PGLYFIGEVLDVTGHLGGFNFQWAWASGYAAAQ 390