Pairwise Alignments

Query, 516 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 510 a.a., D-ribose transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  311 bits (798), Expect = 3e-89
 Identities = 188/495 (37%), Positives = 283/495 (57%), Gaps = 20/495 (4%)

Query: 12  PFLEVRDLEKRFGGVRALKGVSFTIERGRTYHLMGENGCGKSTLIKIISGAQPAD-GGEL 70
           P LE++ + K F G+R LK V   +  G  + LMGENG GKSTL+KI+SGA  AD GGE+
Sbjct: 5   PLLEMQGISKTFNGLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGEI 64

Query: 71  TINGKKVEGLTPIGALAAGIETVYQDLSLLPNLSVEENVALTQQLVASNGSLARR---LD 127
            I G+ +    P  A A GI  +YQ+LSL PNLSV EN+ L ++L        RR   +D
Sbjct: 65  RIAGQLIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGREL--------RRGWTID 116

Query: 128 LKGLRETAVRALKDVGLPTEPAFLSTPVEELPIATRQLIAIARAIASDAGLVIMDEPTTA 187
            KG+    +  L+ +G    PA   T V  L IA RQL+ IARA+ + A +++MDEPTT 
Sbjct: 117 RKGMEAGCIEVLQRLGAEFTPA---TRVSSLSIAERQLVEIARALHAHAKILVMDEPTTP 173

Query: 188 LTRREVDNLIRVVHGLHAKGVSVLFVTHKLDECKAIGGQAIIMRDGLKVAECDVATQSKT 247
           L+ RE D L  ++  L ++G+++++++H++ E  A+  +  ++RDG  + E      S  
Sbjct: 174 LSSRETDRLFALIKQLRSQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAE 233

Query: 248 ELGFWMTGKNLDD---TRYRVDTHGDETLLSVERLGGAGFDDVSFTVSKGEIFGITGLLD 304
            L   M G++L       +     G+  +   +   G      SF +  GE+ GI GL+ 
Sbjct: 234 ALVKMMVGRDLSGFYKKEHAAYNPGNVVMRVRDMADGKRVRHCSFDLHAGEVLGIAGLVG 293

Query: 305 SGRNELALSLAGVESARRGSVLLAGRRAD-LSSPASAIEAGIGYVPEDRLSEGLFLGKSI 363
           +GR ELA  +   +    G++ + G+    L +PA AI AG+ Y+ EDR ++GLFL  S+
Sbjct: 294 AGRTELARLIFAADPRTSGTLEVVGKAVTPLRTPADAIRAGVVYLTEDRKAQGLFLDMSV 353

Query: 364 RENIVMAVLDRLRGAFGLLDSRRAKALAQKTVDDLQVATPDIDNPVMSLSGGNQQRVLIG 423
            +NI +        A G+LD   A   +   +  L +          +LSGGNQQ+VL+ 
Sbjct: 354 ADNINVCACVPDAHAGGVLDRDHALQRSNDAIKSLSIRVASGKVNAGALSGGNQQKVLLA 413

Query: 424 RWLTIEPSLLILHGPTVGVDVGSKDTIFRIIQRLAGDGMSVVIISDDLPELLQNCDRVMV 483
           R L ++P +LIL  PT GVD+GSK  I+RII +LA  G+ +V+IS +LPE++  CDRV++
Sbjct: 414 RLLEVKPHVLILDEPTRGVDIGSKSEIYRIINQLAQAGIGIVVISSELPEIIGTCDRVLI 473

Query: 484 MRKGR-VADIFPAEG 497
           MR+G+ VA++  A G
Sbjct: 474 MREGQLVAEVGGASG 488



 Score = 72.0 bits (175), Expect = 5e-17
 Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 22/236 (9%)

Query: 287 VSFTVSKGEIFGITGLLDSGRNELALSLAGVESARRGS-VLLAGRRADLSSPASAIEAGI 345
           V   V  GEI  + G   +G++ L   L+G   A  G  + +AG+      PA+A   GI
Sbjct: 25  VGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGEIRIAGQLIPTFDPATAKALGI 84

Query: 346 GYV-------PEDRLSEGLFLGKSIRENIVMAVLDRLRGAFGLLDSRRAKALAQKTVDDL 398
             +       P   ++E ++LG+ +R       +DR     G ++      + Q+   + 
Sbjct: 85  AVIYQELSLCPNLSVAENIYLGRELRRGWT---IDRKGMEAGCIE------VLQRLGAEF 135

Query: 399 QVATPDIDNPVMSLSGGNQQRVLIGRWLTIEPSLLILHGPTVGVDVGSKDTIFRIIQRLA 458
             AT      V SLS   +Q V I R L     +L++  PT  +     D +F +I++L 
Sbjct: 136 TPATR-----VSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRETDRLFALIKQLR 190

Query: 459 GDGMSVVIISDDLPELLQNCDRVMVMRKGRVADIFPAEGLEEDAIYKSMMAEDGQG 514
             G++++ IS  + E+    DRV V+R G        + L  +A+ K M+  D  G
Sbjct: 191 SQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAEALVKMMVGRDLSG 246