Pairwise Alignments

Query, 217 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  114 bits (284), Expect = 2e-30
 Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 8/210 (3%)

Query: 7   TWNDLAFLAQGAGMTLAVTAVAVTAGTVLGILFGVIRFQIGPY----WSAPLTLLLDVFR 62
           T+  L +L Q  G TL ++A+A   G V G  FG++  +I P     W A   + ++  +
Sbjct: 7   TFTHLMYLVQAIGWTLVLSAIAFVLGAVGG--FGLMLARISPRPWLRWFA--VVYIECIQ 62

Query: 63  SVPLLIQLVLGNAFQSIAKLGWGAFTTSGVVLSLYTAAFCAEIVRGGISSVPVTTRRAAR 122
            +PLLI L +     S+  L   +   +G+ + +Y +A+  +I RG I ++P     A+ 
Sbjct: 63  GIPLLILLFIVYFGLSVYGLSLPSLVAAGLAMMIYVSAYLGDIWRGCIEAMPKPQWEASE 122

Query: 123 SLGMTWWQDMRYIVAPLATRVSLPSWIGLTLGVMKDSALVLWLGLVELLRASQILVTRLQ 182
            L ++ WQ +R ++ P A R+SLP  +G  + ++K ++L   +G VEL RA QI+   + 
Sbjct: 123 CLALSRWQTLRLVIIPQAVRLSLPPTVGFLVQIIKMTSLASVIGFVELTRAGQIINNTIF 182

Query: 183 EPLFILLICGAIYFLLSFPVARLGGYLEKR 212
           +P  +  + GA YF L +P++R    +EK+
Sbjct: 183 QPFLVFFLVGAFYFALCYPLSRWSEAMEKK 212