Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 249 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  103 bits (256), Expect = 4e-27
 Identities = 55/205 (26%), Positives = 108/205 (52%), Gaps = 1/205 (0%)

Query: 16  PQMLDGAVVTLQVAVLSMVIGVACAIALTVFRLSGSRILGGIATTWVEVARNTPALFQIY 75
           P  ++GA +TL++  L++VIGVA    +   + S  R+L    T ++E+ RNTP L QI+
Sbjct: 15  PVFINGAWLTLKMTALAVVIGVAVGTLVAFAKRSKIRLLSRACTIYIEIVRNTPFLVQIF 74

Query: 76  MAHFGLGNFGIHLSPYTALLVGIAFNNAGYLAENFRGALKAIPDTQARAGRSLGMTSLQA 135
           + +FGL +FG+ +  + A ++ +  N A Y AE  R  L+++P  Q  A   LG++  + 
Sbjct: 75  LLYFGLASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQIEAAECLGLSKWRI 134

Query: 136 FRLIVLPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGITQELNARSFRTFEFFAL 195
              ++L   +   +   T+Q +  +  +++   +    +L  I   + + +FR+ E + +
Sbjct: 135 GWHVMLQPSIEKVYPALTSQFLLMMQASAMASQISAE-ELTAIANTVQSDTFRSLETYIV 193

Query: 196 AAVIYYLIAKAVTLAARAFAWRMFR 220
            A +Y +++  + L   A    +FR
Sbjct: 194 VAALYLVLSLFIKLVTWALGEYLFR 218