Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  120 bits (301), Expect = 2e-32
 Identities = 67/219 (30%), Positives = 114/219 (52%), Gaps = 1/219 (0%)

Query: 3   NYTFHWNQALRALPQMLDGAVVTLQVAVLSMVIGVACAIALTVFRLSGSRILGGIATTWV 62
           NY F ++    A P +L G  +T+Q+++++ V+G+  AI     + SG   L  I   ++
Sbjct: 2   NYQFQFDAVFAAWPLLLKGTWITIQLSLIATVLGLVVAIFCAWGKTSGPGWLRFIINAYI 61

Query: 63  EVARNTPALFQIYMAHFGLGNFGIHLSPYTALLVGIAFNNAGYLAENFRGALKAIPDTQA 122
           EV RNTP L Q++   F L   G+  SP TA LV +  N   Y  E  R  +++IP  Q 
Sbjct: 62  EVIRNTPFLVQLFFFFFALPAIGLRWSPQTAALVAMVVNLGAYATEIIRAGIESIPKGQI 121

Query: 123 RAGRSLGMTSLQAFRLIVLPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGITQEL 182
            AGR+L +   + FR +++   L+  +   T+Q +  ++++S  V+V    DL  +   L
Sbjct: 122 EAGRALNLKPWEIFRFVIIKPALKAIYPALTSQFI-LLMLSSAVVSVISADDLTSVAANL 180

Query: 183 NARSFRTFEFFALAAVIYYLIAKAVTLAARAFAWRMFRY 221
            +++FR+FE + + A IY  +A A +   +    R   Y
Sbjct: 181 QSQTFRSFEIYIVVAAIYLALALAFSAMFKLIYKRTLNY 219