Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  108 bits (271), Expect = 6e-29
 Identities = 64/216 (29%), Positives = 115/216 (53%), Gaps = 1/216 (0%)

Query: 4   YTFHWNQALRALPQMLDGAVVTLQVAVLSMVIGVACAIALTVFRLSGSRILGGIATTWVE 63
           Y F ++       Q+++G + TL  A  S+V+G+A  +A ++  + G + L G+   +VE
Sbjct: 3   YQFQFDALAPYTGQLVEGLLHTLGYAASSIVLGMAIGVAGSLALVYGGKPLRGVTRVYVE 62

Query: 64  VARNTPALFQIYMAHFGLGNFGIHLSPYTALLVGIAFNNAGYLAENFRGALKAIPDTQAR 123
             RNTPAL Q+++ +FGL N GI L    A ++ +A     Y+ E FR  L ++P   + 
Sbjct: 63  FFRNTPALVQLFLIYFGLPNLGIRLEAPVAGVISLALYCGAYMVEVFRSGLMSVPRGLSE 122

Query: 124 AGRSLGMTSLQAFRLIVLPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGITQELN 183
           AG +LG+   Q    ++    LR  F    +QMV  ++ TSL   +G+  D+      ++
Sbjct: 123 AGAALGLRPRQVLVHVLFVPALRNVFPSLASQMVLTLIGTSLISQIGVE-DIFHAGSFID 181

Query: 184 ARSFRTFEFFALAAVIYYLIAKAVTLAARAFAWRMF 219
           +R+FR+FE + +   +Y++  +A+ +       R+F
Sbjct: 182 SRTFRSFEVYLVICAMYFVAVQALRVILGFVQRRLF 217