Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 217 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

 Score =  101 bits (251), Expect = 1e-26
 Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 5/208 (2%)

Query: 5   TFHWNQALRALPQMLDGAVVTLQVAVLSMVIGVACAIALTVFRLSGSRILGGIATTWVEV 64
           TF W + L     +L GA  ++ +  ++  IG        + RLS    +  +A  ++ V
Sbjct: 3   TFGWPEFLF----LLRGAGWSIVLTAIAFSIGSLTGGFFAIMRLSQYGSVRNVAAGYITV 58

Query: 65  ARNTPALFQIYMAHFGLGNFGIHLSPYTALLVGIAFNNAGYLAENFRGALKAIPDTQARA 124
            ++ P L  ++M+++GL  FG  + P  A  V ++   + YLAE +RG+++A+P  Q  A
Sbjct: 59  IQSIPVLMILFMSYYGLTLFGFEIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEA 118

Query: 125 GRSLGMTSLQAFRLIVLPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGITQELNA 184
             SL +T  Q +R ++LPQ LR++  P    +V  +  TS+   VG   +L+   Q +N 
Sbjct: 119 SASLALTRFQQYRYVILPQALRLSLPPTVGFLVQLVKNTSIVSVVGF-VELSRAGQLVNN 177

Query: 185 RSFRTFEFFALAAVIYYLIAKAVTLAAR 212
            +FR F+ F + A++Y+ I   ++  +R
Sbjct: 178 ATFRPFQVFFVVALLYFAICFPLSRLSR 205