Pairwise Alignments

Query, 268 a.a., amino acid ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 267 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 5/259 (1%)

Query: 6   LAFGLVAATALTSPAHADK-LDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFDVDYCND 64
           LA   VA  A T  A A   LD+++ + T++ AV  D+PP GS D+N +P G DV+    
Sbjct: 13  LAMVSVAMLAATGAAQAQNALDNVLKAKTIKIAVPTDYPPYGSVDKNMKPQGLDVEMAEL 72

Query: 65  LATALGVTAEIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGMTVPYFAFEMAVTA 124
           +A  LGV  E+V      RIP L + + D+ +++     ER K +  T  Y  F  AV A
Sbjct: 73  IAAKLGVKVELVPVTSANRIPYLQTRKADLVISTLGKNPEREKVIDFTSAYAPFFQAVYA 132

Query: 125 NEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEGEFRPYQTQADVFLALSQGQLD 184
            +   + SF DM GK V  T G  E   L N+V A    ++R ++       A   GQ  
Sbjct: 133 AKSMKLTSFADMAGKTVAVTRGAMEDQEL-NKV-APPNVDYRRFEDNNATIAAFVAGQTQ 190

Query: 185 ATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFLNYLNLFVNQQVRTG 244
              +++ VA   +   K P +S   K         +   + E      +N  +    + G
Sbjct: 191 TIATSAAVAGDML--SKNPKVSAEFKLLLKDSPCFVGVAKGETALKTKVNEIIAAAKKDG 248

Query: 245 RYAELYEKWVGGEAPSLAV 263
               + +KW+G  A  L V
Sbjct: 249 TLDAMSKKWLGKAAGDLPV 267