Pairwise Alignments

Query, 268 a.a., amino acid ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 258 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 96.7 bits (239), Expect = 4e-25
 Identities = 80/258 (31%), Positives = 114/258 (44%), Gaps = 9/258 (3%)

Query: 1   MKTSVLAFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFDVD 60
           MKT + A  LV A  L   AHADKL DI A G +R A  +D  P G  D   +P G DV+
Sbjct: 4   MKT-LFAAALVCAAPLL--AHADKLADIKAKGAIRIATTIDAAPWGFTDAAGKPTGLDVE 60

Query: 61  YCNDLATALGVTAEIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGMTVPYFAFEM 120
              ++A A+GV  E+ +     RIP L+S +VDV +A+   + ERAK V  + PY A  +
Sbjct: 61  LAENVAKAMGVKLELQQVTGANRIPYLLSNKVDVVIAALGSSPERAKQVAFSKPYAAVYL 120

Query: 121 AVTANEKS-GIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEGEFRPYQTQADVFLALS 179
            V   + +       D+ G+ V    G+   ++L     A G    R   T + +   LS
Sbjct: 121 GVYGGKGTPKFAKVSDLAGQTVAVPKGSTPDLSLSE--LAPGAKLIRLEDTASTISAFLS 178

Query: 180 QGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFLNYLNLFVNQ 239
            GQ       + +AQ         GI +         Y+A+     E   L  +N  ++ 
Sbjct: 179 -GQAPLFAENNFIAQKVADENPAKGIEMKSLIRISPAYMAV--QPSETALLAEMNKIIDA 235

Query: 240 QVRTGRYAELYEKWVGGE 257
           Q   G  A L  KW   E
Sbjct: 236 QAADGSLAALRLKWFKDE 253