Pairwise Alignments

Query, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., Inner membrane ABC transporter permease protein YcjO from Xanthobacter sp. DMC5

 Score =  134 bits (337), Expect = 3e-36
 Identities = 88/283 (31%), Positives = 140/283 (49%), Gaps = 6/283 (2%)

Query: 27  IAGYLFVLPDALGLFIFLGVPMALSLVLSVFEVNGFGGYSFVGARNYLRMWNDPLFWKGA 86
           + G  F++P A+ L  FL  P+ L + L   +        F+G  NY  +W D LFW   
Sbjct: 25  VLGIAFMVPAAVFLLFFLTYPLGLGVWLGFTDTRIGREGVFIGLENYQSLWGDSLFWLVV 84

Query: 87  RVTALYAAMLVPLLYVCGLGLALLVQRTDRFNAIMRSMFFAPHMVSLVVVALVWQFMVVD 146
             T LY      L +  GL LALL+     F A  R++   P +V  V+ A+ + ++   
Sbjct: 85  FNTLLYTIAASILKFALGLWLALLLNENLPFKAFFRAVVLLPWVVPTVLSAIAFWWIFDS 144

Query: 147 KIGVVS--RLTAALDIGGISLLGDPNFALITIVLVSVWFLMGFYMLIFLGGLQDIPRQYY 204
           +  ++S   +   L    I+ LGD   A  +++  +VW  + F  +  L GLQ I    +
Sbjct: 145 QYSIISWALIKMGLISAPINFLGDVTNARASVIAANVWRGIPFVAISLLAGLQTISPSLH 204

Query: 205 EAAMIDGAGAIARFWFITLPLLKPTSFFVIMVSMVAAVAGAQAFDIIYVMTKGGPANATS 264
           EAA +DGA    RF +ITLP+L P    V+  S++        F +IYV+T+GGP N+T 
Sbjct: 205 EAATLDGATNWQRFRYITLPMLSPIIAVVMTFSVLFTFTD---FQLIYVLTRGGPLNSTH 261

Query: 265 VLIVYIYQQAFGFGAFGYAAAMASILVVALM-IVTAVFFALTR 306
           ++    +Q+A   G+ G  AA+A  ++  L+  +   +F L R
Sbjct: 262 LMATLSFQRAIPGGSLGEGAAIAVAMIPFLLAAILFSYFGLQR 304