Pairwise Alignments

Query, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 315 a.a., ABC transporter for N-Acetyl-D-glucosamine, permease protein 1 (from data) from Sinorhizobium meliloti 1021

 Score =  110 bits (275), Expect = 4e-29
 Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 17/284 (5%)

Query: 31  LFVLPDALGLFIFLGVPMALSLVLSVFEVNGFGGYSFVGARNYLRMWNDPL----FWKGA 86
           +F+LP  +     + +P+  +L  S +     G  +FVG  N+  ++ DP     FW   
Sbjct: 23  VFLLPALVVYTAVMILPLFETLRQSFYNTVD-GQLTFVGLGNFKVLFGDPRWAADFWNAL 81

Query: 87  RVTALYAAMLVPLLYVCGLGLALLVQRTD-RFNAIMRSMFFAPHMVSLVVVALVWQFMVV 145
           +   ++  + + +    G+ LA ++     RF A  R+  F P ++S V+V  +W+ ++ 
Sbjct: 82  KNNFVFFLIHMAVQNPIGIALAAMLSVPKLRFGAFYRTAIFLPTLLSFVIVGFIWKLILS 141

Query: 146 DKIGVVSRLTAALDIGGI--SLLGDPNFALITIVLVSVWFLMGFYMLIFLGGLQDIPRQY 203
              GV   L   + +  +    LG P+ ALI + L+SVW  +G  M++    L +IP + 
Sbjct: 142 PIWGVAPYLLDTVGLRSLFGPWLGKPDTALIAVSLISVWQYIGIPMMLIYAALLNIPDEV 201

Query: 204 YEAAMIDGAGAIARFWFITLPLLKPTSFFVIMVSMVAAVAGAQAFDIIYVM--TKGGPAN 261
            EAA +DG    ++FW I LPL+ P    + +VS++  V    AFD+IY +     GP  
Sbjct: 202 TEAAELDGVTGWSQFWKIKLPLILPA---IGIVSILTFVGNFNAFDLIYTVQGALAGPDK 258

Query: 262 ATSVLIVYIYQQAFGF----GAFGYAAAMASILVVALMIVTAVF 301
           +T +L   +Y+  FGF    G     A +A+I+ + ++   A++
Sbjct: 259 STDILGTLLYRTFFGFQLQLGDRSMGATIAAIMFLIILAGVALY 302