Pairwise Alignments

Query, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  145 bits (366), Expect = 1e-39
 Identities = 100/287 (34%), Positives = 152/287 (52%), Gaps = 13/287 (4%)

Query: 27  IAGYLFVLPDALGLF-IFLGVPMALSLVLSVFEVNGFGGYSFVGARNYLRMWNDPLFWKG 85
           + G+LFV P ALGL  +F+  P+A SL +S     G     F G  N +R+WNDP+F K 
Sbjct: 14  VNGWLFVAP-ALGLITLFMVYPIAWSLWMSFQSGRGMT-LKFAGFANIVRLWNDPVFIKA 71

Query: 86  ARVTALYAAMLVPLLYVCGLGLALLVQRTDRFN-AIMRSMFFAPHMVSLVVVALVWQFMV 144
              T  Y  + VP++ +  L LA L+         + R+  F P + SLV  +++++ M 
Sbjct: 72  LTNTMTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVAYSVLFKGMF 131

Query: 145 VDKIGVVSRLTAALDIGG--ISLLGDPNFALITIVLVSVWFLMGFYMLIFLGGLQDIPRQ 202
               G+V+    A+ +    I  L  P +A + ++L   W   G+ M+ +L  LQ+I + 
Sbjct: 132 ATD-GIVNSTLQAIGLAASPIPWLTHPFWAKVLVILAITWRWTGYNMIFYLAALQNIDKS 190

Query: 203 YYEAAMIDGAGAIARFWFITLPLLKPTSFFVIMVSMVAAVAGAQAFDIIYVMT--KGGPA 260
            YE A IDG  A AR   +T+PLLKP   F  ++S +  +   Q FD +Y +T  KGGP+
Sbjct: 191 IYEVARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTL---QLFDEVYNLTEGKGGPS 247

Query: 261 NATSVLIVYIYQQAFGF-GAFGYAAAMASILVVALMIVTAVFFALTR 306
           NAT  L +YIY   F F    GYAA ++ ++VV + ++  V F   R
Sbjct: 248 NATLTLSLYIYNLTFRFMPNLGYAATVSYVIVVLVALLAFVQFFAAR 294