Pairwise Alignments

Query, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 311 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  162 bits (409), Expect = 1e-44
 Identities = 96/287 (33%), Positives = 157/287 (54%), Gaps = 12/287 (4%)

Query: 19  LSAKHREWIAGYLFVLPDALGLFIFLGVPMALSLVLSVFEVNGFGGYSFVGARNYLRMWN 78
           L    R+W+ G L+V P  L + +F  VP+ ++  +S+      G   ++G  NY  +WN
Sbjct: 20  LRKPRRDWM-GLLYVAPALLLVLVFFLVPLGMTAWMSLHNWPLIGMPRWIGFANYKVLWN 78

Query: 79  DPLFWKGARVTALYAAMLVPLLYVCGLGLALLVQRTDRFNAIMRSMFFAPHMVSLVVVAL 138
           D  FW     T  Y       L + G GLALL++R   F  + R+ FF P ++     +L
Sbjct: 79  DINFWNALAFTIRYTVAATVGLMLAGFGLALLIERPRPFANLYRNAFFLPVVIGFASASL 138

Query: 139 VWQFMVVDKIGVVSRL--TAALDIGGISLLGD--PNFALITIVLVSVWFLMGFYMLIFLG 194
           +W ++     G+ S L  T  L  G ++LL    P+F  +T ++  +W + GFYM+I + 
Sbjct: 139 LWSWLSNVDSGLFSPLAETLGLTDGRVNLLATFAPSFWSVTAMV--IWKMAGFYMVILMS 196

Query: 195 GLQDIPRQYYEAAMIDGAGAIARFWFITLPLLKPTSFFVIMVSMVAAVAGAQ-AFDIIYV 253
           GLQ IP  + EAA IDGA A+ RF FITLPL++ +      ++++  ++G+  AFD  Y+
Sbjct: 197 GLQAIPTDFIEAARIDGANALQRFRFITLPLVRRS----FALALILCISGSMLAFDQFYI 252

Query: 254 MTKGGPANATSVLIVYIYQQAFGFGAFGYAAAMASILVVALMIVTAV 300
           +  GGP N T   + +I+ Q+F     GY AA++ +L+  L++++ V
Sbjct: 253 ILAGGPQNKTITAVYWIFSQSFVSFRLGYGAALSMVLLAILVVLSIV 299