Pairwise Alignments

Query, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 331 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  141 bits (355), Expect = 2e-38
 Identities = 97/287 (33%), Positives = 150/287 (52%), Gaps = 20/287 (6%)

Query: 30  YLFVLPDAL--GLFIFLGVPMALSLVLSVFEVNGFGGYSFVGARNYLRM-----WNDP-- 80
           Y+F++P+ +  G+F FL + +A+    +           FVG  N+ ++     + DP  
Sbjct: 39  YIFLMPNLVLFGIFTFLPIAIAVGYAFTGGTELLISDRPFVGLENFGKLLDCQSYMDPGS 98

Query: 81  ----LFWKGARVTALYAAMLVPLLYVCGLGLALLVQRTDRFNAIMRSMFFAPHMVSLVVV 136
               LFW     T  + A  V    +  L  AL++ R        R+MFF P ++S VV+
Sbjct: 99  CRESLFWTAIWNTLWFVAFNVVATLLVALITALILNRAIAARGFFRAMFFYPVLLSPVVI 158

Query: 137 ALVWQFMVVDKIGVVSRLTAALDIGGISLLGDPNFALITIVLVSVWFLMGFYMLIFLGGL 196
            L+W++ + D+ G+++     L +     L D  ++   +V+VSVWF MGFY LI L GL
Sbjct: 159 GLIWKWFL-DRNGLLNAFFQMLGVPPEIFLLDVGWSRFFVVVVSVWFHMGFYTLILLAGL 217

Query: 197 QDIPRQYYEAAMIDGAGAIARFWFITLPLLKPTSFFVIMVSMVAAVAGAQAFDIIYVMTK 256
           Q IP+  YEAA ID A        ITLPLL P    V+++ M+ +V   Q FD  +V+T 
Sbjct: 218 QAIPKDLYEAAAIDAASPRRTLLRITLPLLGPNLLVVLILLMIRSV---QIFDEAWVLTN 274

Query: 257 -GGPANATSVLIVYIYQQAFG--FGAFGYAAAMASILVVALMIVTAV 300
            GGP  A + ++ YIYQ AFG     FG A+A + ++ + L+ +T V
Sbjct: 275 GGGPGTANTFVVQYIYQMAFGSDLRLFGLASAASVLMGLVLLALTLV 321