Pairwise Alignments

Query, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 308 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  187 bits (475), Expect = 3e-52
 Identities = 107/307 (34%), Positives = 178/307 (57%), Gaps = 7/307 (2%)

Query: 1   MTTIAQSAARRRHAGRTRLSAKHREWIAGYLFVLPDALGLFIFLGVPMALSLVLSVFEVN 60
           MT   Q+A  +   G   ++   R+   GYLF+ P  +G+ +F+ VP+ L    S+ E N
Sbjct: 1   MTLALQTAQTQARRGFWTMA--RRDAATGYLFIAPQLIGIVVFVLVPLVLVFWYSLHEWN 58

Query: 61  GFGG-YSFVGARNYLRMWNDPLFWKGARVTALYAAMLVPLLYVCGLGLALLVQRTDRFNA 119
              G + F G  NY ++ +DP   +   VTA+++A L  L     LGLALL+ +   F  
Sbjct: 59  VLAGSFRFTGIANYQKLLSDPAIGEVLAVTAVFSAGLALLNMSLALGLALLLNQQLAFMT 118

Query: 120 IMRSMFFAPHMVSLVVVALVWQFMVVDKIGVVSRLTAALDIGGISLLGDPNFALITIVLV 179
           + R++FF+P +VSLV   +VW F++ +  G ++ L   + + G + L  P  A+I++++V
Sbjct: 119 MFRTLFFSPVVVSLVAWTIVWSFLLQNN-GGINGLLQMIGVEGPNWLRHPTTAMISVIVV 177

Query: 180 SVWFLMGFYMLIFLGGLQDIPRQYYEAAMIDGAGAIARFWFITLPLLKPTSFFVIMVSMV 239
                +G  M++FL  LQ +PR+ +EAA +DG     +F+ ITLP++ PT   +++ S+V
Sbjct: 178 QALKNVGLNMILFLAALQGVPRELFEAARVDGVPRFKQFYRITLPMISPT---ILLASIV 234

Query: 240 AAVAGAQAFDIIYVMTKGGPANATSVLIVYIYQQAFGFGAFGYAAAMASILVVALMIVTA 299
             V   Q F  I ++T+GGP  +T+VL+ Y+YQQAF F  FGY + ++ IL+V +  +T 
Sbjct: 235 TIVGALQVFAQIMILTQGGPGFSTTVLVYYLYQQAFQFYLFGYGSTLSIILLVIVGALTF 294

Query: 300 VFFALTR 306
           + + L R
Sbjct: 295 IQWHLRR 301