Pairwise Alignments

Query, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 308 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  150 bits (379), Expect = 4e-41
 Identities = 97/303 (32%), Positives = 158/303 (52%), Gaps = 13/303 (4%)

Query: 1   MTTIAQSAARRRHAGRTRLSAKHREWIAGYLFVLPDALGLFIFLGVPMALSLVLSVFEVN 60
           MT +  S   R  +      A  R    G +F  P  L L     VPM    VL+ F V 
Sbjct: 1   MTVVDISTPLRAKSRLRPPKADRRMMWRGLMFAAPAGLLLLAIYIVPM---FVLAGFSVT 57

Query: 61  GF--GGYS--FVGARNYLRMWNDPLFWKGARVTALYAAMLVPLLYVCGLGLALLVQRTDR 116
            +  G  S  F+G  N+++ + DP+F +    TALYA +++P      LG+ALLV    R
Sbjct: 58  DYRLGALSTRFIGLGNFVKAFQDPVFLRALANTALYAIIVIPFGVFLALGVALLVYNRKR 117

Query: 117 FNAIMRSMFFAPHMVSLVVVALVWQFMVVDKIGVVSRLTAALDIGGISLLGDPNFALITI 176
                   +F P   +LV +A VWQF++   +G V+     L    ++ L +P   + T+
Sbjct: 118 SRTFWEVAYFLPVTATLVAMATVWQFLLHPSLGPVNAAIKWLGFEPVAFLSNPVLLIPTM 177

Query: 177 VLVSVWFLMGFYMLIFLGGLQDIPRQYYEAAMIDGA-GAIARFWFITLPLLKPTSFFVIM 235
            L+ +W ++GF M++FL GL  I +  +EAA +DGA   + RF  +T P+L PT+ FV++
Sbjct: 178 ALMGIWQVLGFNMVLFLAGLTAISKDLHEAARLDGAKNPVDRFLTVTWPMLGPTTMFVVV 237

Query: 236 VSMVAAVAGAQAFDIIYVMTKGGPANATSVLIVYIYQQAFGFGAFGYAAAMASILVVALM 295
            + ++A    + F+ + V+TKG   + T  L+  +Y + F +   GYAAA+  I +V ++
Sbjct: 238 TTSISAF---KVFETVAVLTKGRSGSET--LLFDLYLEGFEYSNTGYAAALTIIFLVIVL 292

Query: 296 IVT 298
           I++
Sbjct: 293 ILS 295