Pairwise Alignments

Query, 263 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 259 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 14/226 (6%)

Query: 5   LVALSAIVTRENLRFVRQRGRFLAALVRPLVWLIVFAAGFRAALGVSIIPPYQTYITYEV 64
           LVAL  IV RE  RF R    +   L+ P + ++++   F   +G  I        TY  
Sbjct: 9   LVALQTIVYREVKRFTR---IWPQTLLPPAITMVLYFVIFGNLIGRQI--GDMGGFTYME 63

Query: 65  YILPGLCGMIQLFNGMQSSLALVYDQE-MGSMRLLLTSPLPRWWLLFSKLLAGVIVSILQ 123
           YI+PGL  M  + N   + ++  +  +   S+  L+ SP+    +L    L GV+   L 
Sbjct: 64  YIVPGLIMMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTILIGYTLGGVLRG-LM 122

Query: 124 VAVFLAIAAL--TGITVPPVGYVAVLPALVISGLMLGAFGLLISSTVRQLENFAGVMNFV 181
           V V + + +L  T + V  +G V +L  +V++  +    G + +   R  ++ + +  FV
Sbjct: 123 VGVIVTLLSLFFTHLQVHHLG-VTIL-VVVLTATIFSLLGFINAVFARNFDDISIIPTFV 180

Query: 182 IFPMFFLSSALYPLWKMAESSPLLRDICALNPFTYAVELIRFALYG 227
           + P+ +L    Y +  +    P  + +   NP  + V   R+ + G
Sbjct: 181 LTPLTYLGGVFYSISLL---PPFWQTVSLANPVLHMVNAFRYGILG 223