Pairwise Alignments

Query, 259 a.a., ABC transporter from Sinorhizobium meliloti 1021

Subject, 260 a.a., Bicarbonate transport system permease protein CmpB from Xanthobacter sp. DMC5

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 14/235 (5%)

Query: 18  RALSLGLLLL-----LW--IAAAGFTDDASVLPQPWALWEPFVQAV----SSGALPYHLG 66
           R + LGL  L     LW  +AA+G    A  LP P  + E  V  +    + G LP HL 
Sbjct: 9   RRMVLGLAGLVGFFGLWALVAASGLVGKA-FLPGPLEVAERLVTLLHTSFAGGTLPQHLA 67

Query: 67  MTLWRVICAFVPAMVIGVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCYIWIGLN 126
            +L R    ++ A  +GV +G LMGR   +D  + P       +  +  +    +W G  
Sbjct: 68  SSLQRFSAGYLLAAAVGVPLGLLMGRFRLLDDIVSPLFDALRFIAPIAWVPFAALWFGTG 127

Query: 127 ETAAITAVVLNKIPNVATLLREGARALDPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAA 186
               +  +     P        GAR +DP     A +        +  V++P   P I A
Sbjct: 128 FGGPVLIIFSGAFPPCLLNAYRGARQVDPRYIEAAEMLGTPTHRLILEVLLPAATPSIVA 187

Query: 187 AARSGIAVIWKIVLVVEFLGRSSGIGFQIHFYFQLFNVAMVLV--YALSFIGVML 239
             R G  + W+ ++  E +  S+G+G+ +         A V+V   A+  +GV++
Sbjct: 188 GLRIGAGLGWQSLVGAELIVASTGVGYMMVQAQSGVATATVMVGMAAIGLVGVLI 242