Pairwise Alignments

Query, 259 a.a., ABC transporter from Sinorhizobium meliloti 1021

Subject, 256 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 17/226 (7%)

Query: 20  LSLGLLLLLW-IAAAGFTDDASVLPQPWALWEPFVQAVSSGALPYHLGMTLWRVICAFVP 78
           L L  ++LLW I  AGF     + P P  +W  F +      +  H   T W  +  F  
Sbjct: 14  LLLVAVILLWQIICAGFEVSDFIFPSPLRIWNQFWEFKE--IIAGHAWRTFWVTMAGFGL 71

Query: 79  AMVIGVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCYIWIGLNETAAI-TAVVLN 137
           A+V+GV +GF++G        + P +  F  LP    + +  +W G+    AI TA +++
Sbjct: 72  AIVVGVLLGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAGPAILTAFLIS 131

Query: 138 KIP---NVATLLREGARALDPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAAAARSGIAV 194
             P   N+AT    G   L+P+L+ +  V   +    L  + +P+  P+   + +  I +
Sbjct: 132 FFPIMVNIAT----GLATLEPELEDVLRVLGAKRWDVLMKIGLPRSMPYFFGSLKVAITL 187

Query: 195 IWKIVLVVEFLGRSSGIGFQIHFYFQLFNVAMVLVYALSFIGVMLL 240
            +    V E    + GIG      + L +    +   L+F G+M++
Sbjct: 188 AFVGTTVSEMTAANEGIG------YLLISAGSAMQMGLAFAGLMVV 227