Pairwise Alignments

Query, 259 a.a., ABC transporter from Sinorhizobium meliloti 1021

Subject, 534 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 2/245 (0%)

Query: 12  QHPALVRALSLGLLLLLWIAAAGFTDDASVLPQPWALWEPFVQAVSSGALPYHLGMTLWR 71
           +H A    L L +LLL  +++        +LP P  +    +  + S  L   L ++L R
Sbjct: 28  RHIAAPVLLPLVVLLLWTLSSQLGWMPPQILPAPSQVMITALTLLQSDLLGQLL-ISLHR 86

Query: 72  VICAFVPAMVIGVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCYIWIGLNETAAI 131
           ++      ++ G  +G LMG     +R L P +     +P L  I L  +  G+++   +
Sbjct: 87  LVNGLAAGVLAGTLLGALMGASVRAERLLYPTVYALAQIPTLGWIPLFMVLFGIDDGLKL 146

Query: 132 TAVVLNKIPNVATLLREGARALDPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAAAARSG 191
             ++   I  V    + G R + P L  +A   R+ PL RL  +I+P   P      R  
Sbjct: 147 AVLIKAVIVPVTLHSQRGVRDVPPALLDVARTLRLPPLTRLTRLILPAALPVWFTGLRLA 206

Query: 192 IAVIWKIVLVVEFLGRSSGIGFQIHFYFQLFNVAMVLVYALSFIGVMLLVEAFFLQPAER 251
           ++  W  ++VVE L  S GIG+ + +  QLF + +VLV  ++ IG+  L+  + +   ++
Sbjct: 207 LSQAWVSLIVVELLASSQGIGYLMVWGRQLFQLDIVLV-CIAVIGLTGLLMEWGINQLDQ 265

Query: 252 RVRRW 256
           R+  W
Sbjct: 266 RLIAW 270



 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 64/238 (26%), Positives = 103/238 (43%), Gaps = 5/238 (2%)

Query: 24  LLLLLWIAAA--GFTDDASVLPQPWALWEPFVQAVSSGALPYHLGMTLWRVICAFVPAMV 81
           LLL LW  A+  G+ D A +LP P  +     Q VS G+LP  +  +LWR +      + 
Sbjct: 294 LLLALWQLASHRGWVD-ALLLPPPGEVLRAIWQGVSDGSLPDAMRHSLWRALAGGALGIS 352

Query: 82  IGVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCYIWIGLNETAAITAVVLNKIPN 141
            G+  G  +G  A  +      L +   +     + L   W+G ++   +T + L     
Sbjct: 353 AGLLAGLALGLSARAEAVCTSTLTLLRQVALFAWLPLITAWVGNDDGGKVTFIALVAFFP 412

Query: 142 VATLLREGARALDPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAAAARSGIAVIWKIVLV 201
           +      G       L  +A V R+  L RLR +I+P  AP +    R  +   W   + 
Sbjct: 413 MLVATHRGVHRRSLALQEVAQVLRLPWLRRLRVLILPGAAPALFTGLRLAMIYAWLGAIG 472

Query: 202 VE-FLGRSSGIGFQIHFYFQLFNVAMVLVYALSFIGVMLLVEAFFLQPAERRVRRWRT 258
            E F+   +GIG  +    QL ++ ++L   +  IGV   +     Q  E+R+ RWRT
Sbjct: 473 AEYFMSSGAGIGSLMINAQQLLDMPLIL-SGMLLIGVTGALIDSLGQRLEQRMTRWRT 529