Pairwise Alignments

Query, 259 a.a., ABC transporter from Sinorhizobium meliloti 1021

Subject, 527 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 68/241 (28%), Positives = 102/241 (42%), Gaps = 13/241 (5%)

Query: 24  LLLLLW-IAAAGFTDDASVLPQPWALWEPFVQAVSSGALPYHLGMTLWRVICAFVPAMVI 82
           LL LLW +        A+ LP P  +    +  + SG L   L  +L R +  F     +
Sbjct: 291 LLCLLWQLVTYQRWVHAAFLPAPREVITALLAGLGSGELTSALSASLSRTLAGFALGAGL 350

Query: 83  GVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCYIWIGLNETAAITAVVLNKIPNV 142
           G  +G+L+GR    DR L P L    ++     + L   W GL E+A +  + L      
Sbjct: 351 GCLLGYLLGRSRIADRLLTPLLSALRSVALFAWLPLLTAWFGLEESAKVVFIALAAFFPA 410

Query: 143 ATLLREGARALDPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAAAARSGIAVIWKIVLVV 202
                +G R L P L   A V R+    RLR + +P + P + +  R  +   W   +  
Sbjct: 411 LLASYQGVRHLPPSLLETARVLRLSARQRLRWLTLPAMLPALFSGLRLSLMHAWVGAIGA 470

Query: 203 E-FLGRSSGIGFQIHFYFQLFNVAMVLVYALSFIGVML--LVEAFF---LQPAERRVRRW 256
           E F+   +G+G  +    QLF    V+       GV+L  LV   F   +  AERR+  W
Sbjct: 471 EYFIASGNGLGSMMIRAQQLFQSERVIA------GVVLIALVSTLFYRLITLAERRLTAW 524

Query: 257 R 257
           R
Sbjct: 525 R 525



 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 8/246 (3%)

Query: 15  ALVRALSLGLLLLL--WIAAAGFTDDASVLPQPWALWEPFVQAVSSGALPYHLGMTLWRV 72
           A   AL + LLL+   W+A+        +LP P  + +     +     P  L ++L R+
Sbjct: 23  AACSALLMPLLLVCGWWLASHYDWMSEQILPSPATVADSARDFIPQELAP-QLRVSLARL 81

Query: 73  ICAFVPAMVIGVAIGFLMGRVAAVDRWLDPWLVVFLNLPALVLIVLCYIWIGLNETAAIT 132
                  + +G+ +G L G    +DR   P   V   +P L  I L  + +G+ E  A+ 
Sbjct: 82  AVGLAGGIALGLTLGVLFGLSRTLDRLCMPLFNVLAQIPTLAWIPLLMLALGIGE--ALK 139

Query: 133 AVVLNKIPNVATLLRE--GARALDPDLDSMAAVYRMRPLARLRHVIMPQLAPFIAAAARS 190
            VVL K   V   L    G R     L  +A   R+    RLR +++P + P++    R 
Sbjct: 140 LVVLIKAVTVPVTLCTCAGIRQTPQTLYELARTLRLPWPTRLRRLVIPAMLPYVMTGTRL 199

Query: 191 GIAVIWKIVLVVEFLGRSSGIGFQIHFYFQLFNVAMVLVYALSFIGVMLLVEAFFLQPAE 250
             +  W  ++ VE L  S G+G+ +    QLF + +V V  L+ IG   L     LQ  E
Sbjct: 200 AFSQGWVSLIAVELLASSEGLGYLMVQSRQLFMLDLVFVCILA-IGAFGLAGEQALQRLE 258

Query: 251 RRVRRW 256
           RR   W
Sbjct: 259 RRWIFW 264