Pairwise Alignments

Query, 324 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 319 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  358 bits (918), Expect = e-103
 Identities = 181/313 (57%), Positives = 231/313 (73%), Gaps = 2/313 (0%)

Query: 11  AVLLSAGSAEANKVFVSNERGNNITVLDSESWEVIATFPAGNRPRGITISPDGKELYVCA 70
           A+LL+AG A A+  +VSNE+ N+++++D ++ +V  T   G RPRG+ +S D K LY+CA
Sbjct: 9   ALLLAAGHAVASTAWVSNEKDNSLSLIDMQTLQVTDTLKVGQRPRGLLLSHDNKLLYICA 68

Query: 71  SDDDTVRVFDPETYKELHTLPSGPDPELFALDPSGNPLYIANEDDNLVTVVDVKTRQVLA 130
           SD D V+V D  T K +  LPSG DPE FAL P+   LY++NEDD LVTV+D +T +VL 
Sbjct: 69  SDSDRVQVMDVATRKIIKELPSGKDPEQFALHPNNRWLYVSNEDDALVTVIDTETAKVLG 128

Query: 131 EVPVGVEPEGVAVSPDAKTIINTSETTNMAHFIDASTYKIVHNVLVDQRPRYAEFTADGK 190
           ++ VGVEPEG+AVSPD K  +NTSETTNM H+ID ST  +  + LVDQRPR+ EF  DG 
Sbjct: 129 QINVGVEPEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFNHDGS 188

Query: 191 KLYVSAEIGGTVSVIDVSAAEPKITKKITFEVPGVLPEWLQPVGVKATKDGSRIFVALGP 250
           +L+ SAEIGGTV+++DV  A   I K +TF + GV P+ +QPVG+K + DG   FVALGP
Sbjct: 189 QLWASAEIGGTVTILDV--ASRAILKTLTFSIKGVHPDKVQPVGIKLSADGKYGFVALGP 246

Query: 251 ANRVAVIDGKTDEVLDYFLVGQRVWQMAFTPGEEFLITTNGNSNDVSIIDVKAEKVIRSV 310
           AN VAVID KT EVLDY LVG+RVWQMAFTP E+ L+ TNG S DVS+IDV + KVI+SV
Sbjct: 247 ANHVAVIDAKTFEVLDYLLVGRRVWQMAFTPDEKQLLVTNGVSGDVSVIDVDSLKVIKSV 306

Query: 311 QVGEQPWGVVVAP 323
           +VG  PWGVVV P
Sbjct: 307 KVGRYPWGVVVTP 319



 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 10/132 (7%)

Query: 193 YVSAEIGGTVSVIDVSAAEPKITKKITFEVPGVLPEWLQPVGVKATKDGSRIFVALGPAN 252
           +VS E   ++S+ID+           T +V   L    +P G+  + D   +++    ++
Sbjct: 23  WVSNEKDNSLSLIDMQ----------TLQVTDTLKVGQRPRGLLLSHDNKLLYICASDSD 72

Query: 253 RVAVIDGKTDEVLDYFLVGQRVWQMAFTPGEEFLITTNGNSNDVSIIDVKAEKVIRSVQV 312
           RV V+D  T +++     G+   Q A  P   +L  +N +   V++ID +  KV+  + V
Sbjct: 73  RVQVMDVATRKIIKELPSGKDPEQFALHPNNRWLYVSNEDDALVTVIDTETAKVLGQINV 132

Query: 313 GEQPWGVVVAPD 324
           G +P G+ V+PD
Sbjct: 133 GVEPEGMAVSPD 144