Pairwise Alignments

Query, 324 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 340 a.a., conserved hypothetical protein containing WD40/YVTN repeat domain from Pseudomonas putida KT2440

 Score =  104 bits (260), Expect = 3e-27
 Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 15/240 (6%)

Query: 47  TFPAGNRPRGITISPDGKELYVCASDDDTVRVFDPETYKELHTLPSGPDPELFALDPSGN 106
           +FPAG+ P  +     G   +V  S  + VR+FD E   EL  +P+G  P    L P G 
Sbjct: 107 SFPAGDHPAHVITDVTGLRAFVTDSAANRVRIFDLEQRIELPGIPTGRYPHGLRLSPDGR 166

Query: 107 PLYIANEDDNLVTVVDVKTRQVLAEVPVGVEPEGVAVSPDAKTIINTSETTNMAHFIDAS 166
            LYIAN   + V+++DV T +  A++PVG  P  V  +PD +    +   TN    ID +
Sbjct: 167 TLYIANMKSDSVSLIDVVTLKETAQIPVGKGPVQVGFAPDGRLAFVSLSATNQLGIIDTA 226

Query: 167 TYKIVHNVLVDQRPRYAEFTADGKKLYVSAEIGG-----TVSVIDVSAAEPKITKKITFE 221
             K++  V V + P     T DG+++YV+ +  G      VS++D+           T  
Sbjct: 227 RRKVIGKVDVGRTPIQMMATVDGRQVYVANQGSGQNPDDRVSIVDIQ----------TRS 276

Query: 222 VPGVLPEWLQPVGVKATKDGSRIFVALGPANRVAVIDGKTDEVLDYFLVGQRVWQMAFTP 281
             G +       GV  + DG+ +FV+   A  V+VID  + +V+    VG     ++F P
Sbjct: 277 SLGTVTTGKGAHGVAISSDGAYVFVSNIEAGTVSVIDTSSRKVVATHKVGAGPNGISFEP 336



 Score =  100 bits (248), Expect = 7e-26
 Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 31/339 (9%)

Query: 5   ALAIVSAVLLSAGSAEAN---KVFVSNERGNNITVLDSESWEVIATFPAGNRPRGITISP 61
           ++A+  ++L+  G   AN    V+ +NER  +I+ ++  + +V +T      P  + +SP
Sbjct: 9   SMALGISLLIPLGLVMANPTGNVYTANERSASISQVNLATGDV-STVALPIAPHNLQVSP 67

Query: 62  DGKELYVCA-----------SDDDTVRVFDPETY-KELHTLPSGPDPELFALDPSGNPLY 109
           DG  L V                  + VF      +   + P+G  P     D +G   +
Sbjct: 68  DGSLLLVVGVAGHAGHSSGEKPGGQLLVFSTSALDRPPFSFPAGDHPAHVITDVTGLRAF 127

Query: 110 IANEDDNLVTVVDVKTRQVLAEVPVGVEPEGVAVSPDAKTIINTSETTNMAHFIDASTYK 169
           + +   N V + D++ R  L  +P G  P G+ +SPD +T+   +  ++    ID  T K
Sbjct: 128 VTDSAANRVRIFDLEQRIELPGIPTGRYPHGLRLSPDGRTLYIANMKSDSVSLIDVVTLK 187

Query: 170 IVHNVLVDQRPRYAEFTADGKKLYVSAEIGGTVSVIDVSAAEPKITKKITFEVPGVLPEW 229
               + V + P    F  DG+  +VS      + +ID +  +          V G +   
Sbjct: 188 ETAQIPVGKGPVQVGFAPDGRLAFVSLSATNQLGIIDTARRK----------VIGKVDVG 237

Query: 230 LQPVGVKATKDGSRIFVA-----LGPANRVAVIDGKTDEVLDYFLVGQRVWQMAFTPGEE 284
             P+ + AT DG +++VA       P +RV+++D +T   L     G+    +A +    
Sbjct: 238 RTPIQMMATVDGRQVYVANQGSGQNPDDRVSIVDIQTRSSLGTVTTGKGAHGVAISSDGA 297

Query: 285 FLITTNGNSNDVSIIDVKAEKVIRSVQVGEQPWGVVVAP 323
           ++  +N  +  VS+ID  + KV+ + +VG  P G+   P
Sbjct: 298 YVFVSNIEAGTVSVIDTSSRKVVATHKVGAGPNGISFEP 336



 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 8/231 (3%)

Query: 98  LFALDPSGNPLYIANEDDNLVTVVDVKTRQVLAEVPVGVEPEGVAVSPDAKTIINTSETT 157
           L   +P+GN +Y ANE    ++ V++ T  V + V + + P  + VSPD   ++      
Sbjct: 22  LVMANPTGN-VYTANERSASISQVNLATGDV-STVALPIAPHNLQVSPDGSLLLVVGVAG 79

Query: 158 NMAHFIDAST--YKIVHNVLVDQRPRYAEFTADGKKLYVSAEIGGTVSVIDVSAAEPK-- 213
           +  H          +V +     RP ++ F A     +V  ++ G  + +  SAA     
Sbjct: 80  HAGHSSGEKPGGQLLVFSTSALDRPPFS-FPAGDHPAHVITDVTGLRAFVTDSAANRVRI 138

Query: 214 ITKKITFEVPGVLPEWLQPVGVKATKDGSRIFVALGPANRVAVIDGKTDEVLDYFLVGQR 273
              +   E+PG+ P    P G++ + DG  +++A   ++ V++ID  T +      VG+ 
Sbjct: 139 FDLEQRIELPGI-PTGRYPHGLRLSPDGRTLYIANMKSDSVSLIDVVTLKETAQIPVGKG 197

Query: 274 VWQMAFTPGEEFLITTNGNSNDVSIIDVKAEKVIRSVQVGEQPWGVVVAPD 324
             Q+ F P       +   +N + IID    KVI  V VG  P  ++   D
Sbjct: 198 PVQVGFAPDGRLAFVSLSATNQLGIIDTARRKVIGKVDVGRTPIQMMATVD 248