Pairwise Alignments

Query, 601 a.a., methanol dehydrogenase, large subunit from Sinorhizobium meliloti 1021

Subject, 812 a.a., Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8) from Sphingobium sp. HT1-2

 Score =  115 bits (289), Expect = 5e-30
 Identities = 105/388 (27%), Positives = 159/388 (40%), Gaps = 77/388 (19%)

Query: 17  AQVAFANDELQKLIDDPNQWAIQTGDYANLRYSKLDQINKDNVGKLQVAWTFSTGV---- 72
           AQ   A D+    ID P  WA+   +    R++  + IN +NV  LQVAWT+ TG     
Sbjct: 161 AQTPLALDK----IDAPGNWAMFGRNANGTRFAPFNDINLENVSDLQVAWTYRTGRRTTG 216

Query: 73  --LRGHEGSPLVIGDLMYVHTPFPNTVYALDLSKDGQIVWKYEPKQDPNVIPVMCCDTVN 130
             +   E +PL IG+++Y  TP  N V ALD +  G+ +WK++P    +   V C     
Sbjct: 217 AGIGVDENTPLQIGNILYSCTP-ENMVTALD-ADTGKALWKFDPHAH-SAEHVTC----- 268

Query: 131 RGVAYAD---------------------NKIFLHQADTTVVALDAKTGK----------V 159
           RGV Y D                      ++ +   D  ++A+DA TGK          V
Sbjct: 269 RGVGYYDVDADTRLTPSQKAALPDGICRQRLLISTVDARLIAIDAATGKPCADFGKGGTV 328

Query: 160 IWSVKNGDATKGETNTATVMPVKDKILVGISGGEFGV-----RGHVTAYSMADGKVLWRG 214
             +   G   +G+    T +PV    +  + G    +      G V AY    GK+ W  
Sbjct: 329 DLAPGMGPVEQGKRYHPTSVPVLMGHVAVVGGWVRDIVHGEPSGAVRAYDALTGKLAW-- 386

Query: 215 YSMGPDSDTLIDPEKTTHLGKPVGKDSGLTTWEGDQWKIGGGTTWGWYSYDPEENLVYY- 273
                             +G P   D+ +   +  Q+ +     W   +YD + NLVY  
Sbjct: 387 ---------------VWDVGSP---DNAVAAQQNPQFSLETPNVWTVPTYDRDLNLVYLP 428

Query: 274 -GTGNPSTWNPTQRPGDNRWSMTIFARDVDTGMAKWLYQMTPHDEWDYDGVNEMILTEQQ 332
            G G P  W   +     ++   I A D  TG  +W+YQ   HD WDYD  ++ +L +  
Sbjct: 429 TGAGPPDYWGGDRNQAKEKFGAAIVAVDASTGRTRWVYQTVHHDVWDYDVPSQPVLYDVT 488

Query: 333 ID-GKDRKLLTHFDRNGFGYTMDRVTGE 359
            D G     L    + G  + +DR TG+
Sbjct: 489 NDKGLKVPALIQTTKTGNIFVLDRRTGK 516



 Score = 50.4 bits (119), Expect = 3e-10
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 484 IKWSLPEPFSV--WSGALATAGDVVFY-GTLEGYLKAVDAATGKELYRFKTPSGVIGNVM 540
           IK  LP P  +    G  +TA  +VF+ GT + YL+A+D+ TGKE+++ + P+G     +
Sbjct: 711 IKTHLPIPLGMPTLGGPTSTASGLVFFAGTQDNYLRALDSLTGKEVWKARLPAGAPAAPL 770

Query: 541 TY--AREGKQYVAV-LSGVGGWAGIG-LAAGLTNPTEGLGA 577
            Y   R G+QYV + + G+   A +G        P +GL A
Sbjct: 771 IYRSPRTGRQYVVISVGGMSHAADVGDYIIAYALPQKGLAA 811



 Score = 29.6 bits (65), Expect = 5e-04
 Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 15/89 (16%)

Query: 510 TLEGYLKAVDAATGKELYRFKTPSGV-IGNVMTYAREGKQY----VAVLSG----VGGWA 560
           T++  L A+DAATGK    F     V +   M    +GK+Y    V VL G    VGGW 
Sbjct: 303 TVDARLIAIDAATGKPCADFGKGGTVDLAPGMGPVEQGKRYHPTSVPVLMGHVAVVGGWV 362

Query: 561 GIGLAAGLTNPTEGLGAVGGYSALSNYTA 589
              +  G     E  GAV  Y AL+   A
Sbjct: 363 R-DIVHG-----EPSGAVRAYDALTGKLA 385



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 503 GDVVFYGTLEGYLKAVDAATGKELYRF 529
           G++++  T E  + A+DA TGK L++F
Sbjct: 230 GNILYSCTPENMVTALDADTGKALWKF 256



 Score = 25.4 bits (54), Expect = 0.010
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 148 TVVALDAKTGKVIWSVKNGDA-TKGETNTATVMPV 181
           T+ A+D KT K++W V  G     G     T +P+
Sbjct: 683 TMTAIDLKTKKIVWQVPLGTVRDTGPMGIKTHLPI 717