Pairwise Alignments

Query, 747 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 1423 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  233 bits (595), Expect = 4e-65
 Identities = 143/394 (36%), Positives = 217/394 (55%), Gaps = 9/394 (2%)

Query: 359  IHADEQTKIEAALRHAKEAAEAAHTSKTRFLAAASHDLLQPINAAKLYLSMLTDKVGQPG 418
            +   E+ +   AL  AK  AE A+ +K+RFLAAASHDL QP+ +  L   +L        
Sbjct: 807  VDVTERRRAADALETAKHDAELANNAKSRFLAAASHDLRQPLQSLVLLQGLLAKVASGEK 866

Query: 419  TEEVVRRLKRSFTSIESLLQALLDISRLDSSGAEFNVTSFNLGNLLQGVAEDLAPLATER 478
             E +V+RL  + +++  +L ALLDI+++++   +  + +F + +LL  + E+L   A   
Sbjct: 867  VERLVKRLDETISAMSGMLNALLDINQIEAGTIKAEIVTFPINDLLDRMREELTYHARSA 926

Query: 479  GIDLRIVPSSRWVSSDQRYLMRCVQNLVVNAIQYTERGRVLVGCRLTGDAVRIEVWDTGV 538
             + L ++P S  V SD R L + ++NL+ NA++YT RGRVLVGCR  G  +RIEVWDTG+
Sbjct: 927  KLSLSVIPCSLSVESDPRLLEQMLRNLISNALKYTPRGRVLVGCRRHGPWLRIEVWDTGI 986

Query: 539  GISEEDRTRIFKEFTRASGAA--KGPGMGLGLSIVERACRHLDHPIRLASQPGRGSVFSI 596
            GI E +   IF E+ +   AA  +  G+GLGLSIV+R  R L+HP+++ S+P  GSVFSI
Sbjct: 987  GIPETELRAIFDEYHQLHNAARERNLGLGLGLSIVQRLGRLLEHPVQVRSRPEHGSVFSI 1046

Query: 597  EVPLAAPGHASVSEDPRMEPMLDGS-----LDLIVMIVENDADELHAMTQVLESWGASVL 651
            +V LA P  A     P +   L G          V+++E+D D    +  +L + G +V 
Sbjct: 1047 DVKLAPP--APERRVPALPAPLPGKDTGSRKAAAVLVIEDDPDVRSLLELLLTTEGHAVT 1104

Query: 652  AADSTADAAALMQEIGTAPDILLVDYQLDDEDNGIETIHTLRALAGAEIPAIIISANRQR 711
             A     A AL++     P+++L DY L +   G+ET   LRA  G  IP +I++ +   
Sbjct: 1105 VAPDGDTAVALVERNAIRPELILADYNLPNGMTGLETASRLRARLGRRIPVVIVTGDIST 1164

Query: 712  QFLQLCNEMSFAVLTKPVQLVRLRALIDWKTRAR 745
              L+         L KPV+   L  +I     AR
Sbjct: 1165 TTLRDIAGQDCVQLNKPVKADELTLIIQRLLAAR 1198



 Score = 32.0 bits (71), Expect = 2e-04
 Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 62/279 (22%)

Query: 254 LSLLKKGSPFQRIVEHVERHEILD--REGRRSRVAGWFKAVRRGEAVQERF------RRR 305
           L  L    P+ R+V      ++L   REG R+++     A+ +    ++R        RR
Sbjct: 517 LYYLGSTDPYLRLVPGHPTQDLLSMAREGIRTKLRA---AIHQASQDKKRVVVTGGRARR 573

Query: 306 DG--MSLDIRIHSLPDDG---FIVSIMDV------------TAETQASALLEQRVQERTA 348
           DG   S  I +H L  +G    +V  +D             T        LE+ ++   A
Sbjct: 574 DGEPFSFSIAVHPLQSEGEDLLLVCFLDAATPGVSPAPSHPTRSVSRVTELERELETTRA 633

Query: 349 ELTEANRLLQIHADEQTKIEAALRHAKEAAEAAHTSKTRFLAAASHDLLQPINAAKLYLS 408
           EL  A R L++ ++EQ  +        E  ++ +         AS + LQ +N       
Sbjct: 634 ELEGAIRNLELSSEEQKAVNEEALSVNEEFQSTNEE-----LLASKEELQSLN------E 682

Query: 409 MLTDKVGQPGTEEVVRRLKRSFTSIESLLQALLDISRL------------DSSGAEFNVT 456
            LT   GQ   +E + R + + + ++++L +  D++ L             ++ A FNV 
Sbjct: 683 ELTALNGQ--LQETLERQRTTSSDLQNVLYS-TDVATLFLDTEMKIRFFTPATRALFNVI 739

Query: 457 SFNLGNLLQGVAEDLAPLATERGIDLRIVPSSRWVSSDQ 495
             ++G  L     DL  LA     D  ++   + V SDQ
Sbjct: 740 PSDVGRPL----SDLNSLAA----DATLITDVKAVLSDQ 770