Pairwise Alignments

Query, 616 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 573 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  107 bits (268), Expect = 1e-27
 Identities = 123/482 (25%), Positives = 201/482 (41%), Gaps = 42/482 (8%)

Query: 104 LFNTLSVAVGAISLSLLVGTVLAWLISRTDMFGRRWFATALIVPYMLPAWTFALAWTTLF 163
           L  T  + +G   ++L+V    AWL++     GR     AL++P  +P +  A ++  + 
Sbjct: 66  LAETGLLVLGVGVVTLVVAVPCAWLVATCTFPGRSVLEWALLLPLAVPGYIVAFSYLDVL 125

Query: 164 K-----NRTVGGQPGWLEATGLTPPDWLAYGQFPITIILALHYTPFVILLFGSALRRFDS 218
                    +    G     GL  PD  + G   + +   L+  P+V L   ++     +
Sbjct: 126 HPLGPVQEALRALLGIASPRGLRLPDVRSTGGCILVLSAVLY--PYVYLSARASFVLQSA 183

Query: 219 QLEDSARILGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFGVPYVLGLPVKFEVLS 278
              + AR LGA R +  L+I LPL RPA+++ + L+  + LG+ G    LG+      L+
Sbjct: 184 AALEVARTLGASRWRAFLRIGLPLARPAIVAGLTLVLLEVLGDIGASEFLGV----RTLT 239

Query: 279 TSLFRSIASRQTGVAGVIAGSIMLIGIITLWIDARLVREARRFVTIGSKGSMNRQSRLGR 338
            S++ +  +R           +ML  ++ L +  R  R ARRFV  GS          G 
Sbjct: 240 VSIYSTWVNRSNLPGAAQIALVMLALVLGLILLERWARRARRFVATGSARPQAPLRLTGL 299

Query: 339 MRLPAAGFAATVFLLSVGLPLLTLLLSTVMKM-----PARFTLDNFTLDYWIGRDLDTIA 393
               AA F A   +L   +PLL L +S   +M     P R           +G    T A
Sbjct: 300 QGFAAAAFCALPVMLGFLVPLLHLSISAARRMAETGFPTRI----------LGEAATTAA 349

Query: 394 LKTG---ILLSSDLWTAARNTLTIVGIASVTSGILGLLVGYVVIRTPVRLLSVYLRQVTF 450
           L  G   + L   L  A    LT   +AS  + +  L  GY V   P  +L+V L     
Sbjct: 350 LAAGTVTLALGLGLVVALGQRLTRAPLASGFARVASL--GYAV---PGTVLAVGL----L 400

Query: 451 LPYLVPGIAFAAAYLSLFAVPRGPLPALYGTVVILVLALIADQMPYASRAGISA-MTQLG 509
            P         AA    F +  G L +  G  +++ LA+    +P     GI A   +L 
Sbjct: 401 SPLAGFDNMLDAAMKQAFGISTGLLLSGSGAALVMALAIRFLAIPV---GGIEAGFAKLS 457

Query: 510 KDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFISGIKGLSLFVILAVPSTDVLT 569
              + AA+  G+   R +  +++P+ + +L T  LL F+  +K L   ++L     + L 
Sbjct: 458 PHLDMAARSLGSSQPRTVRRVLLPLLRPALATAALLVFVDAMKELPATLLLRPLGLETLA 517

Query: 570 TY 571
           T+
Sbjct: 518 TH 519



 Score = 58.2 bits (139), Expect = 1e-12
 Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 3/224 (1%)

Query: 107 TLSVAVGAISLSLLVGTVLAWLISRTDMFGRRWFATALIVPYMLPAWTFALAWTTLFKNR 166
           T ++A G ++L+L +G V+A     T       FA    + Y +P    A+   +     
Sbjct: 347 TAALAAGTVTLALGLGLVVALGQRLTRAPLASGFARVASLGYAVPGTVLAVGLLSPLAGF 406

Query: 167 TVGGQPGWLEATGLTPPDWLAYGQFPITIILALHYTPFVILLFGSALRRFDSQLEDSARI 226
                    +A G++    L+     + + LA+ +    +    +   +    L+ +AR 
Sbjct: 407 DNMLDAAMKQAFGISTGLLLSGSGAALVMALAIRFLAIPVGGIEAGFAKLSPHLDMAARS 466

Query: 227 LGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFGVPYVLGLPVKFEVLSTSLFRSIA 286
           LG+ + +   +++LPL+RPAL ++ +L+F   + E     +L  P+  E L+T ++   A
Sbjct: 467 LGSSQPRTVRRVLLPLLRPALATAALLVFVDAMKELPATLLLR-PLGLETLATHVYGE-A 524

Query: 287 SRQTGVAGVIAG-SIMLIGIITLWIDARLVREARRFVTIGSKGS 329
           +R T   G +A   I+L+G+  + + AR+   A      G++GS
Sbjct: 525 ARGTYEDGALAALVILLVGLGPVMLLARMSSSALAASADGARGS 568