Pairwise Alignments

Query, 616 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 574 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  121 bits (304), Expect = 7e-32
 Identities = 141/581 (24%), Positives = 256/581 (44%), Gaps = 50/581 (8%)

Query: 29  RLKVALREPTTLIG--VLTALLFTYLIVVPIISIVLDAVRVQFGHERRLSKDVGDLTLNY 86
           R  +AL +   ++G   L  +L    +++P+++I            R  S + G      
Sbjct: 17  RAGIALGDRLFVVGGKSLLLILLVLAVLMPLLAIFW----------RGFSGEAGQGGGLL 66

Query: 87  LDRALFSPVSADLFWRPLFNTLSVAVGAISLSLLVGTVLAWLISRTDMFGRRWFATALIV 146
             R LF+  SA   W  L N+LSVA    ++ + +  + A+ + RT +  +  +    ++
Sbjct: 67  AARELFT--SASFHWL-LGNSLSVAFTVAAIVVPLAYLFAFALQRTLIPAKGLWRGISLL 123

Query: 147 PYMLPAWTFALAWTTLFKNRTVGGQPGWLEATGLTPPDWLAYGQFPITIILALHYTPFVI 206
           P + P+   A+A   LF N+ +          GL   +   YG + I +  A++  P  +
Sbjct: 124 PLLAPSMLPAIALVYLFGNQGL--------LRGLLSDN--IYGFWGIVLGEAIYTFPHAL 173

Query: 207 LLFGSALRRFDSQLEDSARILGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFGVPY 266
           ++  SAL   D++L D+A  +GA   +    I  P  R A+ ++  L+F   + +FGVP 
Sbjct: 174 MILLSALSLADARLFDAASSMGAGSWRAFTSITWPASRQAVFAAFCLVFTLTITDFGVPV 233

Query: 267 VLGLPVKFEVLSTSLFRSIASRQTGVAGVIAGSIMLI-GIITLWIDARLVREARRFVTIG 325
           V+G    ++VL+   ++++  +Q    G + G ++L+  + +  +DA L R  R+   +G
Sbjct: 234 VVG--GDYQVLALEAYKAVVGQQQFGRGALIGMVLLLPALFSFTVDAWLRR--RQGEAMG 289

Query: 326 SKGSMNRQSRLGRMRLPAAGFAA--TVFLLSVGLPLLTLLLSTVMKMPARFTLDNFTLDY 383
            +  +           P+ G  A     +L V   LL ++   V      F   N +L  
Sbjct: 290 GRAQVFEPK-------PSRGRDACFLTIVLLVCAALLVVIGMAVYSSLVTFWPYNLSLSL 342

Query: 384 WIGRDLDTIALKTGILLSSDLWTAARNTLTIVGIASVTSGILGLLVGYVVIRTP-VRLLS 442
                 DT         +   W A RN++T+    ++   I+     Y++ +T   RLL+
Sbjct: 343 RHYMFEDT---------AGGGWLAYRNSVTMAIGTALIGSIVIFTGAYLMEKTQGQRLLN 393

Query: 443 VYLRQVTFLPYLVPGIAFAAAYLSLFAVPRGPLPALYGTVVILVLALIADQMPYASRAGI 502
             LR ++F+P  VPG+     Y+  F +   PL  LYG + +LV+  IA  +  A     
Sbjct: 394 HALRLLSFIPMAVPGLVLGLGYVFFFNLNGNPLHVLYGGMGLLVVCTIAHYLTTAQMTAT 453

Query: 503 SAMTQLGKDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFISGIKGLSLFVILAV 562
           +A+ QL  + E AA    A   +  + + +PI   +L+  +   F+S +  +S  + L  
Sbjct: 454 TALRQLDGEFEAAALSLKAPLYKHFLRVTVPICLPALLDIIRYLFVSAMTTVSAAIFLYS 513

Query: 563 PSTDVLTTYSLRLVDYHYTQAANAV-VLIIAAIAYCGTLIA 602
           P T +     L + D      A A+  LI+   A    L+A
Sbjct: 514 PDTLLAAIAVLNMDDAGNVGGAAAMSTLILLTSAGASLLLA 554