Pairwise Alignments

Query, 616 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 570 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  149 bits (376), Expect = 3e-40
 Identities = 145/569 (25%), Positives = 259/569 (45%), Gaps = 69/569 (12%)

Query: 34  LREPTTLIGVLTALLFTYLIVVPIISIVLDAVRVQFGHERRLSKDVGDLTL-NYLDRALF 92
           +R    L  +L A      +VVP++ ++  A +          K  G  TL N+ D    
Sbjct: 14  VRPGPALAALLIAAFLLLFLVVPVVQVIFVAFQ---------DKTTGAFTLVNFADF--- 61

Query: 93  SPVSADLFWRPLFNTLSVAVGAISLSLLVGTVLAWLISRTDMFGRRWFATALIVPYMLPA 152
                DLF R   N+  V+  ++ ++ L+   LA+L +R +  G     +  I+P ++P 
Sbjct: 62  --FQNDLFMRSFGNSFYVSAMSVVVASLLALPLAYLTTRFEFRGSVLIQSLGIIPLIMPP 119

Query: 153 WTFALAWTTLFKNRTVGGQPGWL--EATGLTPPDWLAYGQFPITIILALHYTPFVILLFG 210
           +  A+A   LF      G    L  +  G + P     G   +  + ++HY PF+++   
Sbjct: 120 FIGAVAMQLLFGRN---GSVNLLLRDHFGFSIP--FMEGLNGVIFVQSIHYFPFILINLS 174

Query: 211 SALRRFDSQLEDSARILGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFGVPYVLGL 270
           ++L+  D  +E+SA+ LG    ++  +I+ PL  P  ++   L+F K   + G P +L +
Sbjct: 175 ASLKNIDRAMEESAQNLGCHGFRLFRRIVFPLAMPGYVAGASLVFIKVFDDLGTPLLLNV 234

Query: 271 PVKFEVLSTSLFRSIASRQTGVAG----VIAGSIMLIGIITLWIDARLVREARRFVTIGS 326
               ++L+   +  I+S   G+A     VI+  ++   ++ LW+ A  +R  + + T+  
Sbjct: 235 N---DMLAPQAYLRISS--IGIADPMGYVISVVLIACSLLALWVSALAMR-GKDYATVQR 288

Query: 327 KGSMNRQSRLGRMRLPAA-GFAATVFLL----SVGLPLLTLL-LSTVMKMPARFTLDNFT 380
            G    + RL  + + AA G    + +L     VGL LL+   + +   +P  FTL ++ 
Sbjct: 289 GGGGLAKRRLKPLEMVAAYGIVLLILVLVLAPHVGLGLLSFATIWSFSPLPDAFTLKHY- 347

Query: 381 LDYWIGRDLDTIALKTGILLSSDLWTAARNTLTIVGIASVTSGILGLLVGYVVIRTPVRL 440
                     T+  ++G  ++        NTL    +A++   ++G  + Y+V+RT +  
Sbjct: 348 ---------HTVFSESGQYIT--------NTLLYASLAALLDVVIGTAIAYLVLRTKLPG 390

Query: 441 LSVYLRQVTFLPYLVPGIAFAAAYL-SLFAVPRG----PLPALYGTVVILVLALIADQMP 495
              +L  +      VPG+     YL S + VP      PL   +   +ILV AL   ++P
Sbjct: 391 RQ-WLDYIAMAALAVPGVVLGIGYLRSFYGVPMPFTGQPLSNFW---LILVFALAIRRLP 446

Query: 496 YASRAGISAMTQLGKDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFISGIKGLS 555
           YA RA  +A+ Q+    EEAA+  GA  LR +  IV+P+  G ++ G +  F +    LS
Sbjct: 447 YALRACTAALQQVSSSLEEAAENLGATKLRTVGRIVVPLMSGGILAGFVTSFATAAVELS 506

Query: 556 LFVILAVPSTDVLTTYSLRLVDYHYTQAA 584
             ++L    +D    Y L    Y Y Q+A
Sbjct: 507 ATIMLVHSQSDAPLAYGL----YVYMQSA 531