Pairwise Alignments

Query, 616 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 285 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 90.9 bits (224), Expect = 6e-23
 Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 28/222 (12%)

Query: 106 NTLSVAVGAISLSLLV----GTVLAWLISRTDMFGRRWFATALIVPYMLPAWTFALAWTT 161
           N L V+ G   ++ LV    G ++AW+++R    GRR+    + +P+ LP     +A TT
Sbjct: 66  NALRVSFGTAFIAALVNAVFGVIVAWVLTRYRFPGRRFVDAIVDLPFALPTAVAGIALTT 125

Query: 162 LFKNRTVGGQPGWLEATGLTPPDWLAYGQFPITIILALHYT--PFVILLFGSALRRFDSQ 219
           L+ NR      GW+ +  L  P  +     P  I++AL +   PFV+      +   D Q
Sbjct: 126 LYANR------GWVGS--LFEPFGIKIAFTPTGIVIALIFIGLPFVVRTVQPVMEEIDRQ 177

Query: 220 LEDSARILGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFG--------VPYVLGLP 271
           +E+ A  LGA R Q   +++LP + PA+L+   L FA+ +GE+G        +PYV  + 
Sbjct: 178 VEEVAATLGANRFQTITRVLLPSLTPAILTGFALAFARGVGEYGSVIFIAGNIPYVSEIA 237

Query: 272 VKFEVLSTSLFRSIASRQTGVAGVIA----GSIMLIGIITLW 309
               V+    F   A+  TG+A ++       + LI +I  W
Sbjct: 238 PLLIVIRLEEFNYAAA--TGIATIMLIISFAMLFLINLIQAW 277



 Score = 51.2 bits (121), Expect = 6e-11
 Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 23/221 (10%)

Query: 390 DTIALKTGILLSSDLWTAARNTLTIVGIASVTSGILGLLVGYVVIRT--PVRLLSVYLRQ 447
           D IA+ T     S    A R +     IA++ + + G++V +V+ R   P R    ++  
Sbjct: 54  DFIAIAT----DSRTLNALRVSFGTAFIAALVNAVFGVIVAWVLTRYRFPGRR---FVDA 106

Query: 448 VTFLPYLVPGIAFAAAYLSLFAVPRGPLPALYGTVVI--------LVLALIADQMPYASR 499
           +  LP+ +P      A  +L+A  RG + +L+    I        +V+ALI   +P+  R
Sbjct: 107 IVDLPFALPTAVAGIALTTLYA-NRGWVGSLFEPFGIKIAFTPTGIVIALIFIGLPFVVR 165

Query: 500 AGISAMTQLGKDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFISGI--KGLSLF 557
                M ++ +  EE A   GA   + +  +++P    +++TG  L F  G+   G  +F
Sbjct: 166 TVQPVMEEIDRQVEEVAATLGANRFQTITRVLLPSLTPAILTGFALAFARGVGEYGSVIF 225

Query: 558 VILAVPSTDVLT--TYSLRLVDYHYTQAAN-AVVLIIAAIA 595
           +   +P    +      +RL +++Y  A   A +++I + A
Sbjct: 226 IAGNIPYVSEIAPLLIVIRLEEFNYAAATGIATIMLIISFA 266