Pairwise Alignments

Query, 343 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 423 a.a., Candidate type III effector Hop protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 115/423 (27%), Positives = 169/423 (39%), Gaps = 105/423 (24%)

Query: 2   LVILADDLTGALDSAAPFAGRGLRTEVALALDSVDAALADAPDILVVNVKSREVSADEAR 61
           ++++ADD TG+ D+    A +G RTEV L+     +  A   D+LV+N +SR + AD+A 
Sbjct: 3   MIVIADDFTGSNDTGVQLAKKGARTEVMLSASQKPSRRA---DVLVINTESRAMPADQAA 59

Query: 62  KATSDVLKHIPESA---RIFKKVDSRLKGNIEAELDATPFAR----AVVAPAIPDFGRIV 114
            A    L    E++    ++KK+DS  +GNI AE+ A   A     AV+A AIP  GR  
Sbjct: 60  SAVYAALSPWCETSPAPLVYKKIDSTFRGNIGAEVTAAMRASQRKLAVIAAAIPAAGRTT 119

Query: 115 VDGHVRGFGV--------------------------EAPIPVAERFGRHAGR-------- 140
           ++G     GV                          ++ IPV E F +   R        
Sbjct: 120 LEGKCLVNGVPLLETEFASDPKTPIVSSRIAEIVALQSEIPVYEVFLQDVRRGGLSALLT 179

Query: 141 --------TLIPDTMSRTDM-LAALASAEAAGCDLMIGARGLADAL--AHLMTDSETLPL 189
                    ++ D +   D+ L A A+ E     L++GA GLA+AL     M D +    
Sbjct: 180 AYAAEGEGIIVVDAVEERDLTLIAQAACEQPSMPLLVGAAGLANALPVELFMQDRQ---- 235

Query: 190 IPLPRQPILIVVGSRDLITVEQVDVLRENHSTEYVPAAGGRVQQPSAPATGTVTIIQATE 249
               R P+L+V GS    T  QVD        E V     R+   SA       + QA  
Sbjct: 236 ----RLPVLVVAGSMSEATRRQVDNALCRGRAEVVDIDAARMVSDSAEQEIASVVEQACA 291

Query: 250 GV--------------------------TPLGPAEVSANLA--------DSVVPAFTGGA 275
            +                          + +   ++   L+        + +  A  GG 
Sbjct: 292 LLSQHRHTILRTSRRAEDRQLIDALCEKSAMSRQQLGERLSQRLGVVTLNIIEQARIGG- 350

Query: 276 ATLLLTGGATAEAVLERMGVSRFRLLGECMPGIAL-----AFADGRYIITKSGGFGGPDT 330
             L LTGG  A AV   +G   +R+  E  P I       +  D   +ITK+GGFG   T
Sbjct: 351 --LFLTGGDIATAVAGALGAEGYRIQSEVAPCIPCGTFVNSEIDDLPVITKAGGFGSDST 408

Query: 331 LSD 333
           L D
Sbjct: 409 LCD 411