Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  129 bits (325), Expect = 2e-34
 Identities = 136/528 (25%), Positives = 224/528 (42%), Gaps = 57/528 (10%)

Query: 3   MKRTLIMGALMLGSALAPAFAASGPVKIVLPEEADL--LEPCMATRSNIGRIIMQNVSET 60
           M+R  +   L+    LA    A     +V   EA     +P   T         + V   
Sbjct: 1   MERIALKPLLLAAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNR 60

Query: 61  LTELDVREGKGLMPRLAESWEQKEDG-SWRFNLRTGVKF------SDGTDFNAKDVKYSF 113
           LT+   R G  + P LA SW+  +DG ++ F+LR GVKF      S   DFNA DV ++F
Sbjct: 61  LTQFK-RGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTF 119

Query: 114 DRVMSDKNACESRR-----YFGGMNIK-----IDVVDDTTVDFTVDPVQP--ILPLLLSL 161
           +R++  ++           YF  M +      +D +DD TV F ++ V    +  L +S 
Sbjct: 120 NRLLDAQSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSF 179

Query: 162 LTIVPEETPMEFVRE---------PVGTGPYKLTDWTPGQQIVLSARDDYWGEKPE---V 209
            ++   E   + +++         PVGTGP+    +    QI   A   YW  KPE   +
Sbjct: 180 ASVQSAEYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYW--KPEDVKL 237

Query: 210 TEATYLFRADPAVRAAMVQTGEADLS--PSISQTEATNPATDFSYLDSETVYLR-IDHNI 266
               +    D A R   ++ GE  +S  P  +  E      +   L      L  + +N+
Sbjct: 238 DNLVFAITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNV 297

Query: 267 E--PLNDVRIRRALNLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQA 324
              PL+ +++R+AL++AID+ A +  +   +  LA   +PP    ++P +K  PYDP +A
Sbjct: 298 THPPLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKA 357

Query: 325 KKLIEEAKADGVKVDTPITIIART---ANFPNVTEIMEAIQAQLQEVGLKVELKFVEVAE 381
           K L++EA   GV   T + + A T   A+ PN     + IQ   ++VG+K  +   E  E
Sbjct: 358 KALLKEA---GVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGE 414

Query: 382 HEVYYSKPFKEGRGPQLVAAMHDNSKGDPSFSMFFKYDSEGTQSG----FSDPKVDDLIA 437
               Y K  K G    ++        GDP   +   Y     +      + +P  D L+ 
Sbjct: 415 ----YIKRAKNGEHDAMIYGW-TGDNGDPDNWLGVLYSCAAVKGSNYAKWCNPAYDKLVQ 469

Query: 438 RASAAVGDERAKLWSEVIAYVHDEVVADVLLFHMVGFSRVSERL-DFK 484
           +A  +   E+   W +    +  E V    + +   F  + + + DFK
Sbjct: 470 QAKVSNDREQRIKWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFK 517