Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 543 a.a., Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  149 bits (377), Expect = 2e-40
 Identities = 124/435 (28%), Positives = 197/435 (45%), Gaps = 53/435 (12%)

Query: 53  IMQNVSETLTELDVREGKGLMPRLAESWEQKEDGS-WRFNLRTGVK-------FSDGTDF 104
           +   V  T+ E + R G  ++P LAE W+   DG+ + F+LR GVK       F    DF
Sbjct: 61  VTTQVYNTIVEFE-RGGTKVVPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDF 119

Query: 105 NAKDVKYSFDRVMSD-----KNACESRRYFGGMNIK-----IDVVDDTTVDFTVDPVQPI 154
           NA D  +  +R   +     K   ++  YF  M +      +D +DD TV   ++  QP 
Sbjct: 120 NADDFIFMLERQWKESDPFFKVTSQNHSYFNDMGMPKLLKTVDRIDDYTVKIVLN--QPE 177

Query: 155 LPLLLSL-------------LTIVPEETPMEFVREPVGTGPYKLTDWTPGQQIVLSARDD 201
            P L +L             + ++   TP +  ++P+GTGP+ L  +     I   A   
Sbjct: 178 APFLANLAMQYAGIQSKEYAIAMLKAGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQ 237

Query: 202 YWGEKPEVTEATYLFRADPAVRAAMVQTGEADLSP--SISQTEATNPATDFSYLDSETV- 258
           YWG K ++ +  +    D +VR A +Q GE  + P  + +  +A     +   L+   + 
Sbjct: 238 YWGGKAKIDDLVFAITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLN 297

Query: 259 --YLRIDHNIEPLNDVRIRRALNLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKV 316
             YL  +   +P +DVR+R+A+N+AI+++A +  +   + V A   +PP    +N  VK 
Sbjct: 298 VGYLSYNTTKKPFDDVRVRKAINMAINKKAIIDGVYLTTGVAAKNPIPPTMWSYNDAVKD 357

Query: 317 FPYDPEQAKKLIEEA-KADGVKVDTPITIIARTANFPNVTEIMEAIQAQLQEVGLKVELK 375
            PYDPE AKKL+ +A   DG   D     + R  N PN   I E +QA L ++ +K E+K
Sbjct: 358 DPYDPEAAKKLLAQAGYPDGFSTDLWAMPVQRPYN-PNAKRIAELMQADLAKINVKAEIK 416

Query: 376 FVEVAEHEVYYSKPFKEGRGPQLVAAMHDNSKGDPSFSMF-------FKYDSEGTQSGFS 428
             E  E    Y K  + G   Q+         GDP   ++        K  S    S F 
Sbjct: 417 SFEWGE----YRKRLQAGE-HQMGMLGWTGDNGDPDNFLYTLLGCASAKSASGSNISKFC 471

Query: 429 DPKVDDLIARASAAV 443
               +DL+ +A + V
Sbjct: 472 YQPYEDLVVKAKSTV 486