Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  169 bits (428), Expect = 2e-46
 Identities = 133/398 (33%), Positives = 207/398 (52%), Gaps = 28/398 (7%)

Query: 1   MQMKRTLIM-GALMLGSALAPAFAASGPVK----IVLPEEADLLEPCMATRSNIGRIIMQ 55
           M  +RTL+  GA  L     P  A +   K    I L  E   L+P     + I  +++ 
Sbjct: 1   MLKRRTLLATGAAALTPLALPTIALAQRKKDALVIGLTLEPTGLDPTAKAGAEIAEVVLY 60

Query: 56  NVSETLTELDVREGKGLMPRLAESWEQKED-GSWRFNLRTGVKFSDGTDFNAKDVKYSFD 114
            V ETLT+++     G+ P LAESWE   D  ++ F LR GVKF +G  FNA+ VK+SFD
Sbjct: 61  TVFETLTKIN--SDGGVTPLLAESWEVSPDLKTYTFKLRRGVKFQNGEPFNAQSVKFSFD 118

Query: 115 RVMSDKNACESRRYFGGMNIKIDVVDDTTVDFTVDPVQPILPLLL---SLLTIVPEETPM 171
           R  +  +  + +R F   NI   VVD+ TV      ++P L  LL   S + + P+    
Sbjct: 119 RAAAANSTNKDKRTF--TNIATQVVDEHTVVLINKEIEPDLLFLLGQASAILVEPKSVET 176

Query: 172 EFVREPVGTGPYKLTDWTPGQQIVLSARDDYWG-EKPEVTEATYLFRADPAVRAAMVQTG 230
              + PVGTGPY+L +W  G  IVL+  D + G +  ++ +AT+ F ++PA + A + + 
Sbjct: 177 NATK-PVGTGPYRLDNWAKGSSIVLAKWDGWRGADTVQIRKATFRFISEPAAQTAALLSN 235

Query: 231 EADLSPSISQTEATNPATD-------FSYLDSETVYLRIDHNIEPLNDVRIRRALNLAID 283
           + DL P  S + + +   +       F+    +T+ L I++  +PL+DVR+RRA++ AID
Sbjct: 236 DIDLFPHASVSRSLSQFQNDKRFQIVFNASLGKTI-LAINNKRKPLDDVRVRRAISAAID 294

Query: 284 REAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQAKKLIEEAKADGVKVDTPIT 343
           R+A +   V    V   +   P   G+     V PY+ E+AKKL+ EA   GVK  TP+ 
Sbjct: 295 RKAVIDAAVDGRGVPIGSHYVPGLPGYVDTTGVNPYNIEKAKKLLAEA---GVK--TPLE 349

Query: 344 IIARTANFPNVTEIMEAIQAQLQEVGLKVELKFVEVAE 381
           +       P   +  E I AQL ++G+  +++ VE A+
Sbjct: 350 LELVLPPPPYARQGGELIAAQLAKIGIVAKIQNVEWAQ 387