Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  153 bits (386), Expect = 2e-41
 Identities = 124/475 (26%), Positives = 209/475 (44%), Gaps = 49/475 (10%)

Query: 64  LDVREGKGLMPRLAESWEQKEDGSWRFNLRTGVKFSDGTDFNAKDVKYSFDRVMSDKNAC 123
           ++ R+G  L P LA SW+  +D +W F LRT +K+ DGT F+A D+ +SF R  +   + 
Sbjct: 57  INSRDGGKLEPALASSWKALDDKTWEFKLRTDIKWQDGTPFSADDIVFSFQRSRNVPGSV 116

Query: 124 ESRRYFGGMNI--KIDVVDDTTVDFTVDPVQPILPLLLSLLTIVPEETPMEFVREP---- 177
            S  Y G +     +   D  T+    +   P+LPL ++ + IV +    +   E     
Sbjct: 117 AS--YSGALRTVESVTAKDPATLIVKTNTPNPMLPLEIASIYIVSKHVGEKSKTEDYNAG 174

Query: 178 ---VGTGPYKLTDWTPGQQIVLSARDDYWGEKPEVTEATYLFRADPAVRAAMVQTGEADL 234
              VGTGPYK   + PG + V      Y+G KP   +  Y F  + A R A +  G+ D+
Sbjct: 175 RAVVGTGPYKFVSYVPGDRTVFERNPGYYGPKPLWEKVNYRFINNGAARTAALLAGDVDV 234

Query: 235 SPSISQTEATNPATD-----FSYLDSETVYLR----------IDHNI------EPLNDVR 273
              ++ T+      D     ++Y     + L+          I  N        PL DVR
Sbjct: 235 IDKVAVTDVEKLRKDPKVSVYTYPGLRVLLLQPTFKAGPNEFITDNAGKPLEKNPLLDVR 294

Query: 274 IRRALNLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQAKKLIEEAKA 333
           +R+AL+LAI+R+A +  ++  +   A   +P  + G+NPDVK   Y+ EQAKKL+ EA  
Sbjct: 295 VRQALSLAINRKAIVDRVLQGTVTEANQWMPKGSFGYNPDVKDIAYNAEQAKKLLAEA-- 352

Query: 334 DGVKVDTPITIIARTANFPNVTEIMEAIQAQLQEVGLKVELKFVEVAEHEVYYSKPFKEG 393
            G      I I      +P   E ++A+      +G+K +   VEV    VY  +  K  
Sbjct: 353 -GFPQGFQIAIHVPGDRYPQAPETVQAVAQFWSRIGVKTK---VEVVPWAVYSGRANKNE 408

Query: 394 RGPQLVAAMHDNSKGDPSFSMFFKYDSEGTQSG--------FSDPKVDDLIARASAAVGD 445
               ++A    N  G+  + +     +   + G        +S+  VD  +  A+     
Sbjct: 409 YAVSVIA--WGNGTGEAGYGLLQTLTTPDAKRGRGSNNWGRYSNESVDKALDAATVEFDA 466

Query: 446 ERAKLWSEVIAYVHDEVVADVLLFHMVGFSRVSERLDFKPTMA-TNSMLQLSEIK 499
           +R +      A +  + V  + L+H        + L   P ++   + +Q++ +K
Sbjct: 467 KRREAIFRHAAKLVTDDVGQIPLYHYQNIWAAKKGLKVVPLLSDRTTAMQVTPVK 521