Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  142 bits (357), Expect = 4e-38
 Identities = 122/408 (29%), Positives = 192/408 (47%), Gaps = 45/408 (11%)

Query: 3   MKRTLIMG----ALMLGSALAPAFAASGPVKIVLPEEADLLEPCMATRSNIGRIIMQNVS 58
           M+  L+ G    ALM   ALA      G + +   ++   L+P +        +I +++ 
Sbjct: 1   MRNLLLAGVCTAALMGNPALADDIKQGGEMTVTYKDDVSTLDPAIGYDWQNWSMI-KSLF 59

Query: 59  ETLTELDVREGKGLMPRLAESWEQKEDGS-WRFNLRTGVKFSDGTDFNAKDVKYSFDRVM 117
           + L +  V     L P LAES+E  EDG  + F LR GVKF +G +  A+DVKYS +RV+
Sbjct: 60  DGLMDY-VPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHNGRELTAQDVKYSIERVV 118

Query: 118 SDKNACESRRYF-------------GGMNIKIDVVDDTTVDFTVD-PVQPILPLL-LSLL 162
           +         +F             GG    I V D  T+ F +  P    L ++ L+  
Sbjct: 119 NPATQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFLHVMALNFA 178

Query: 163 TIVPEETP----MEFVREPVGTGPYKLTDWTPGQQIVLSARDDYWGE-KPEVTEATYLFR 217
            +VP+E       +F + PVG+G +KL +WT GQ++V     DYW E  P++   T+   
Sbjct: 179 HVVPKEEVEKHGADFGKNPVGSGAFKLAEWTLGQRLVFERFTDYWNEGLPKLDRITFEVG 238

Query: 218 ADPAVRAAMVQTGEADLS----PSISQTEATNPATDFSYL-----DSETVYLRIDHNIEP 268
            +P V    +Q GE D+     P     E TN   +F  L        T Y+ ++  + P
Sbjct: 239 QEPVVALLRLQNGEIDVPGDGIPPAKFVEVTND-PNFKDLIIRGGQLHTGYVTMNVKMAP 297

Query: 269 LNDVRIRRALNLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQAKKLI 328
            + V +R+A+N+AI+++  L  ++   AV A   +PP   G+  D   + YDPE AKKL+
Sbjct: 298 FDKVEVRKAVNMAINKDRIL-RIINGRAVAANQPLPPSMPGYAKDYAGYAYDPEGAKKLL 356

Query: 329 EEA-KADGVKVDTPITIIARTANFPNVTEIMEAIQAQLQEVGLKVELK 375
           E+A   DG   +  +       N      I +AIQ  L+ +G+   +K
Sbjct: 357 EQAGLGDGFSTELYV------MNTDPQPRIAQAIQQDLKAIGITASIK 398