Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 531 a.a., periplasmic dipeptide-binding protein from Sinorhizobium meliloti 1021

 Score =  135 bits (341), Expect = 3e-36
 Identities = 117/417 (28%), Positives = 182/417 (43%), Gaps = 40/417 (9%)

Query: 74  PRLAESWEQKEDG-SWRFNLRTGVKFSDGTDF------NAKDVKYSFDRVMSDKNACE-- 124
           P LAESW   +DG  + F LR GVKF     F      NA DV +S +R     +     
Sbjct: 71  PGLAESWTISDDGLEYTFKLRPGVKFQTTEFFTPTRELNADDVIFSIERQWKSDHPWHGY 130

Query: 125 ----SRRYFGGMNI-----KIDVVDDTTVDFTVDPVQ-PILP-LLLSLLTIVPEETPMEF 173
               S  YF GM +      ++ VDD TV   +   + P L  L +   +I+ +E   + 
Sbjct: 131 VTGGSWEYFAGMGLPELLESVEKVDDMTVKIKLKRKEAPFLANLAMPFASIMSKEYADKL 190

Query: 174 VRE---------PVGTGPYKLTDWTPGQQIVLSARDDYWGEKPEVTEATYLFRADPAVRA 224
             E         P+GTGP+    +     I   A  D+WG K ++ +  +    D AVR 
Sbjct: 191 QAEGKMNQLNQMPLGTGPFAFVGYQQDAVIRYKAHPDFWGGKQKIDDLVFAITTDAAVRF 250

Query: 225 AMVQTGEADLSP--SISQTEATNPATDFSYLDS---ETVYLRIDHNIEPLNDVRIRRALN 279
             +Q GE  L P  + +  EA     +   ++       YL  +    P + V +R+ALN
Sbjct: 251 QKLQAGECHLMPYPNAADVEAMKADPNLKVMEQAGLNVAYLAYNTTQPPFDKVEVRKALN 310

Query: 280 LAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQAKKLIEEAKADGVKVD 339
            AI+++A +  +    A  AT  +PP    +N  ++   YDPE AKK++E+A    + + 
Sbjct: 311 KAINKQAIVDAVFQGQATPATNPIPPTMWSYNEHIEDDTYDPEAAKKMLEDAGVKDLSMK 370

Query: 340 TPITIIARTANFPNVTEIMEAIQAQLQEVGLKVELKFVEVAEHEVYYSKPFKEGRGPQLV 399
                +AR     N     E +QA   +VG+KVE+   E AE+        K+  G  ++
Sbjct: 371 VWAMPVARPYML-NARRAAELMQADFAKVGVKVEIVSYEWAEY--LEKSKAKDRDGAVIL 427

Query: 400 AAMHDNSKGDPSFSMFFKYDSEG--TQSGFSDPKVDDLIARASAAVG-DERAKLWSE 453
               DN   D         D+ G   ++ + D + D+L+ +A  A    ER KL+ E
Sbjct: 428 GWTGDNGDPDNFLDTLLGCDAVGGNNRAQWCDKEFDELVTKAKEASDVAERTKLYEE 484