Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  126 bits (317), Expect = 2e-33
 Identities = 126/495 (25%), Positives = 221/495 (44%), Gaps = 64/495 (12%)

Query: 55  QNVSETLTELDVREGKGLMPRLAESWEQKEDG-SWRFNLRTGVKF------SDGTDFNAK 107
           + V   LT+ + R G  ++P LA  WE  +DG ++ F+LR GVKF           FNA 
Sbjct: 55  ETVFNRLTQFE-RGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNAD 113

Query: 108 DVKYSFDRVMSDKNACESRR-----YFGGMNI-----KIDVVDDTTVDFTVDPVQP--IL 155
           DV ++F+R++   N           YF  M +     K++ +D+ TV FT++ V    I 
Sbjct: 114 DVLFTFNRMLDKDNPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQ 173

Query: 156 PLLLSLLTIVPEETPMEFVR---------EPVGTGPYKLTDWTPGQQIVLSARDDYWG-E 205
            L +S  +I   E   + ++         +P+GTGP+  + +    QI      DYW  E
Sbjct: 174 NLAMSFASIQSAEYADQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPE 233

Query: 206 KPEVTEATYLFRADPAVRAAMVQTGE---------ADLSPSISQTEATNPAT---DFSYL 253
             ++    +    D +VR   ++  E         AD+ P  +      P     +  Y+
Sbjct: 234 DVKIDNLIFAITTDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYI 293

Query: 254 DSETV-YLRIDHNIEPLNDVRIRRALNLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNP 312
               +  ++  +   P+  +++R+AL++A+D++  + ++   +  LA   +PP    ++ 
Sbjct: 294 AYNVMDKIKGSNEANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDD 353

Query: 313 DVKVFPYDPEQAKKLIEEAKADGVKVDTPITI----IARTANFPNVTEIMEAIQAQLQEV 368
            +K   +DPE+AK+L++EA   G+K  T IT+    + R  N PN   + E +Q+   ++
Sbjct: 354 SIKDAAFDPEKAKQLLKEA---GIKEGTEITLWAMPVQRPYN-PNAKLMAEMLQSDWAKI 409

Query: 369 GLKVELKFVEVAEHEVYYSKPFKEG-RGPQLVAAMHDNSKGDPSFSMFFKYDSEGTQ--- 424
           G+K ++   E  E    Y K  K G +G  L+    DN  GDP   +   Y  +      
Sbjct: 410 GIKAKIVSYEWGE----YIKRSKGGEQGAMLIGWSGDN--GDPDNWLGTLYGCDAVDGNN 463

Query: 425 -SGFSDPKVDDLIARASAAVGDERAKLWSEVIAYVHDEVVADVLLFHMVGFSRVSERL-D 482
            S +     DDLI +A A     +     +   ++  E V    + H   +  +S ++ D
Sbjct: 464 FSKWCYKPYDDLIKQAKATSDQAKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKD 523

Query: 483 FK-PTMATNSMLQLS 496
           FK    A NS   +S
Sbjct: 524 FKISPFALNSFYGVS 538