Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  132 bits (331), Expect = 4e-35
 Identities = 112/414 (27%), Positives = 186/414 (44%), Gaps = 49/414 (11%)

Query: 67  REGKGLMPRLAESWEQKEDG-SWRFNLRTGVKF------SDGTDFNAKDVKYSFDRVMSD 119
           R G  + P LA  WE  ++G  + F+LR GV+F      S    FNA DV ++F+R++  
Sbjct: 64  RGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFNRMLDK 123

Query: 120 KNACESRR-----YFGGMNI-----KIDVVDDTTVDFTVDPVQP--ILPLLLSLLTIVPE 167
            +           YF GM +     +++  D  TV FT++ V    I  L +S  +I+  
Sbjct: 124 GHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFASILSA 183

Query: 168 E---------TPMEFVREPVGTGPYKLTDWTPGQQIVLSARDDYWG-EKPEVTEATYLFR 217
           E          P +  ++P+GTGP+    +    QI      DYW   + ++    +   
Sbjct: 184 EYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNLVFSIN 243

Query: 218 ADPAVRAAMVQTGEAD--LSPSISQTEATNPATDFSYLDSETV---YLRIDHNIEPLNDV 272
            DP+VR   ++  E    L P  +   A    +    L        Y+  +    P + +
Sbjct: 244 TDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQHPPFDRL 303

Query: 273 RIRRALNLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQAKKLIEEAK 332
            +R+A+++A+++EA L  +  D+   A   +PP    ++  +K  PY PE+A++LI++A 
Sbjct: 304 EVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQLIQQA- 362

Query: 333 ADGVKVDTPITI----IARTANFPNVTEIMEAIQAQLQEVGLKVELKFVEVAEHEVYYSK 388
             GVK  T IT+    + R  N PN   + E +QA   ++G KV +   E  E    Y K
Sbjct: 363 --GVKPGTEITLWAMPVQRPYN-PNAKLMAEMLQADWSKLGFKVRIVSYEWGE----YLK 415

Query: 389 PFKEGRGP-QLVAAMHDNSKGDPSFSMFFKYDSEGTQ--SGFSDPKVDDLIARA 439
             K G     L+    DN   D      +  D+ G+   S + DP+ D L+ +A
Sbjct: 416 RMKNGEHDIALIGWTGDNGDPDNWLGTLYSCDAIGSNNYSQWCDPQYDSLVKQA 469