Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  129 bits (323), Expect = 3e-34
 Identities = 132/503 (26%), Positives = 221/503 (43%), Gaps = 65/503 (12%)

Query: 7   LIMGALMLGSALAPAFAASGPVKIVLPEEADLLEPCMATRSNIGRIIMQNVSETLTELDV 66
           L + AL+LG A   A           PE  D+++   A  ++     + N       +D 
Sbjct: 21  LALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETVFN-----RLVDF 75

Query: 67  REGKG-LMPRLAESWEQKEDG-SWRFNLRTGVKF------SDGTDFNAKDVKYSFDRVMS 118
           + G   + P LAE W+   DG ++ F+LR GVKF          D NA DV +S +R + 
Sbjct: 76  KPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQLD 135

Query: 119 DKNACESRR-----YFGGMNIK-----IDVVDDTTVDFTVD-PVQPIL-PLLLSLLTIVP 166
             +    +      YF  M  K     +   D+ TV  T+  P  P L  + +   +I  
Sbjct: 136 PNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSIYS 195

Query: 167 EETPMEFVR---------EPVGTGPYKLTDWTPGQQIVLSARDDYWGEKPEVTEATYLFR 217
            E   + ++         +P+GTGP+    +    Q+      DY+  KP      +   
Sbjct: 196 AEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALVFAIA 255

Query: 218 ADPAVRAAMVQTGEADLS--------PSISQTEATNPATDFSYLDS-ETVYLRIDHNIEP 268
            D  VR   ++  E  ++        PSI Q    +P      +++  T Y+ ++   + 
Sbjct: 256 IDSNVRLQKLRANECQVALYPKPDDVPSIKQ----DPKLKVEEIEALVTGYIAMNTQHKY 311

Query: 269 LNDVRIRRALNLAIDREAFLGTLV-PDSAVLATAIVPPPTLGWNPDVKVFPYDPEQAKKL 327
           LNDVR+R+A+N+A DR+  +  L    +A++     PP  +G+N   +  P D ++A+ L
Sbjct: 312 LNDVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARAL 371

Query: 328 IEEAKADGVKVDTPITIIARTANFP---NVTEIMEAIQAQLQEVGLKVELKFVEVAEHEV 384
           + +A   GV   T IT+  R    P   N     E +QA L+++GLK++++ +E AE   
Sbjct: 372 LSQA---GVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAE--- 425

Query: 385 YYSKPFKEGRGPQLVAAMHDNSKGDPSFSMFFKYDSEGTQSG-----FSDPKVDDLIARA 439
              +  K G    LV+       GDP   +      +  +SG     + +PK  +LI+RA
Sbjct: 426 -MLRRAKNGEA-DLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRA 483

Query: 440 SAAV-GDERAKLWSEVIAYVHDE 461
              +  DERA+L++E +    DE
Sbjct: 484 REVIDNDERARLYNEALKVYDDE 506