Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 535 a.a., dipeptide ABC transporter substrate-binding protein DppA from Escherichia coli ECOR38

 Score =  171 bits (434), Expect = 5e-47
 Identities = 135/449 (30%), Positives = 218/449 (48%), Gaps = 45/449 (10%)

Query: 72  LMPRLAESWEQKEDG-SWRFNLRTGVKFSDGTDF------NAKDVKYSFDRVMSDKNACE 124
           ++P LAE WE  EDG ++ F+LR GVK+ D  +F      NA DV +SFDR  + +N   
Sbjct: 74  VIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYH 133

Query: 125 -----SRRYFGGMNI-----KIDVVDDTTVDFTVD-PVQPILP-LLLSLLTIVPEE---- 168
                S  YF GM +     ++  VDD TV F +  P  P L  L +   +I+ +E    
Sbjct: 134 KVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADA 193

Query: 169 -----TPMEFVREPVGTGPYKLTDWTPGQQIVLSARDDYWGEKPEVTEATYLFRADPAVR 223
                TP +    P+GTGP++L  +    +I   A D YWG KP++    +    D +VR
Sbjct: 194 MMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPKIDTLVFSITPDASVR 253

Query: 224 AAMVQTGEADLSPSISQTEATNPATDFSYLDSETVYLRI---DHNIE--PLNDVRIRRAL 278
            A +Q  E  + P  +  +      D S    E   L +    +N++  PL+DV++R+AL
Sbjct: 254 YAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQAL 313

Query: 279 NLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQAKKLIEEAKAD-GVK 337
             A++++A +  +   + V A  ++PP   G+N DV+ + YDPE+AK L++EA  + G  
Sbjct: 314 TYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFS 373

Query: 338 VDTPITIIARTANFPNVTEIMEAIQAQLQEVGLKVELKFVEVAEHEVYYSKPFKEGRGPQ 397
           +D     + R  N PN   + E IQA   +VG++ ++   E  E    Y K  K+G    
Sbjct: 374 IDLWAMPVQRPYN-PNARRMAEMIQADWAKVGVQAKIVTYEWGE----YLKRAKDGEHQT 428

Query: 398 LVAA-MHDNSKGDPSFSMFFKYDSEGTQSGFSD---PKVDDLIARASAAVG-DERAKLWS 452
           ++     DN   D  F+  F   +    S +S       +DLI  A A    ++R +L+ 
Sbjct: 429 VMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYK 488

Query: 453 EVIAYVHDEVVADVLLFHMVGFSRVSERL 481
           +    +HD+  A +++ H   F  V + +
Sbjct: 489 QAQVVMHDQAPA-LIIAHSTVFEPVRKEV 516