Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 521 a.a., ABC transporter, substrate binding protein (agrocinopines A and B) from Agrobacterium fabrum C58

 Score =  134 bits (338), Expect = 6e-36
 Identities = 124/411 (30%), Positives = 188/411 (45%), Gaps = 68/411 (16%)

Query: 13  MLGSALAPAFAASGPVKIVLPEEA-----------DLLEPCMATRSNIGRIIMQNVSETL 61
           M+G+A A A A++   K    +E            + LEP  A  SN+G  I+  + +TL
Sbjct: 10  MMGTA-AIAVASTAGAKFTFAQERRALRLGVNGLPNSLEPVNAI-SNVGPRIVNQIFDTL 67

Query: 62  TELDVREGKG-------LMPRLAESWEQKEDGSWRFNLRTGVKFSDGTDFNAKDVKYSFD 114
              D    KG       L+P LAESWE+ ++ S RF LR  V F DG +  A DV Y+F 
Sbjct: 68  IARDFF-AKGAPGNAIDLVPALAESWERIDEKSVRFKLRQKVMFHDGVELTADDVAYTFS 126

Query: 115 RVMSDKNACESRRYFGGMNIK-IDVVDDTTVDFTVDPVQPILPLLLSLLT---------- 163
                     S R +G   IK I +    ++DF    V+    + L   T          
Sbjct: 127 ----------SERLWGPEAIKKIPLGKSYSLDFDEPVVEDKYTVTLRTKTPSYLIETFVA 176

Query: 164 -----IVPEET-----PMEFVREPVGTGPYKLTDWTPGQQIVLSARDDYWGEKPEVTEAT 213
                IVP+E       ++F  +PVGTGPYK  ++  G ++VL A D YWG KP  ++ T
Sbjct: 177 SWMSRIVPKEYYKKLGAVDFGNKPVGTGPYKFVEFVAGDRVVLEANDAYWGPKPTASKIT 236

Query: 214 YLFRADPAVRAAMVQTGEADLSPSISQTEATNPATDFSYLDSETVYLRIDH--------N 265
           Y   A+PA R A + +GE D+  +++  +        SY D ET    I++        N
Sbjct: 237 YQIVAEPATRVAGLISGEYDIITTLTPDDI---QLINSYPDLETRGTLIENFHMFTFNMN 293

Query: 266 IEPLNDVRIRRALNLAIDREAFLGTLVPDSAVLATAI-VPPPTLGWNPDVKVFPYDPEQA 324
            E   D ++RRAL LA++R   +  L    A +      P     ++P  K   Y+ E+A
Sbjct: 294 QEVFKDKKLRRALALAVNRPIMVEALWKKQASIPAGFNFPNYGETFDPKRKAMEYNVEEA 353

Query: 325 KKLIEEAKADGVKVDTPITIIARTANFPNVTEIMEAIQAQLQEVGLKVELK 375
           K+L++E+  DG    TPIT       + N    +  +    +++G+ V +K
Sbjct: 354 KRLVKESGYDG----TPITYHTMGNYYANAMPALMMMIEMWKQIGVNVVMK 400